Xiphophorus hellerii (green swordtail): 116718294
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Entry
116718294 CDS
T07363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116718294
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116718294
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
Ig_2
LRR_9
Ig_C17orf99
LRR_Zer-1
LRR_R13L1-DRL21
LRR_LRWD1
LRRNT
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
116718294
NCBI-ProteinID:
XP_032415998
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Position
4:complement(5464310..5478568)
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AA seq
623 aa
AA seq
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MTVLVSSRMVSGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSKCDCNGQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNELKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGYKLGSVPTDALSHVHNLLSLRLRYLNVTDIRDFSFKRLY
RLRILEISHMPALNTMASQSLYGLNLTSLSVTNCNLSTIPYEAINHLRYIRFLNLSFNPI
HTVEGNQLFSLQKLQAFHLAGGQLVAIEPYSFRGLNHLRILNVSRNSLSTLEESVFHSVG
NLETLALYENPLACDCRLLWVFRRRWRLNFNKQQPICASPKIVQGKEFKDFPDVLPPDYF
ICQKSKIVDYKVMESHVDEGTTVHFTCMAEGDPAPVIMWLSPKKEYITTKTIGSRLSVSS
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKSFAFISNQPSD
EGANVTRTTVPFPFDVKTLIVATTMGFISFLGVVLFCLVILFLWSRGKDSTKSTIEVEYV
PRKEETEEASPTEAPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagtaggatggtgtccggagaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctgatgctgggcaccgtcctttcaggctccacc
actggctgcccttcaaaatgtgactgcaatggccaggagcgatcagtcgtctgccatcga
agaaggctggcagctcttcctgagggcatccccactgaaactagactcctagacctcagc
aaaaaccgtctgaagactctagggcctgaggagttcattaattaccctcagctggaggag
ctgcaactgaacgaaaacactatttcatccattgagccgggggctttcagtaacctaatg
aaccttcgaacgctaggcttgcgcaacaacgagctaaagctcattcagcttggagtgttc
acaggcctgaccaatctcacacagttggatataagtgagaacaaaattgttattttgctc
gactatatgttccaagagctgtacaacttgagggctttggaagttggggacaatgaccta
gtctttatatcgcctcgatcatttcatggtctgagcaatcttgaaagcctcaacattgaa
gggtataaactgggctcagttcctactgatgcccttagtcatgtacataacttgctatct
cttcgattacgctatctgaacgtcactgatataagggacttctcctttaaaaggctgtat
cggttaagaatactggagatttctcatatgcctgccttgaatactatggcttcacaaagc
ttgtatggactcaacctcacatcattgtctgtcacaaattgcaatctgtctaccatcccc
tatgaagccattaatcatctcagatatattcggtttttaaatctatctttcaatcctatt
catactgttgaaggtaaccaacttttcagtcttcaaaaactccaggcatttcacttggct
ggtggacaattggtggccattgagccttactcattccgtggactcaaccacctacgtatt
ctgaacgtgtcaagaaatagcttgagcacccttgaggagtccgtttttcactcagtggga
aacctggagaccctggctttgtatgaaaaccctttggcttgcgactgccgcctgctatgg
gtcttccgcaggaggtggaggcttaacttcaacaaacagcagcccatttgtgcttcacct
aagattgtgcaaggaaaagagttcaaagatttcccagacgtactgcctccagactacttc
atctgtcagaaatcaaagattgtggattataaggttatggaaagccatgttgatgaagga
actactgttcacttcacgtgcatggcagagggtgatccagctccagtgataatgtggcta
tcccccaagaaggagtatattactacaaagactatagggtcaaggctctcagtatccagc
gagggtacactggaggtacgctacgcccaaattcaggacaatggcacctacttgtgcatt
gccagtaatgctgctggcaatgacacaaaagctgctcacctttttgtacacagctactcc
ccgaattggccacatcagccaaataagtcatttgcttttatttctaaccagccaagtgat
gaaggtgctaatgtgaccagaacaacagtcccatttccatttgatgtaaagacacttatt
gtcgcaaccacgatgggatttatctcattccttggagtggtcctcttttgtcttgtaatt
ttattcctctggagtagaggaaaagacagcacaaagtcaactattgaagttgaatatgtg
ccacgaaaagaggagacagaggaggccagtccaactgaggcacctgtacaattcaacatg
aaaatcatgtga
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