Xiphophorus hellerii (green swordtail): 116718341
Help
Entry
116718341 CDS
T07363
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116718341
03036 Chromosome and associated proteins [BR:
xhe03036
]
116718341
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116718341
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116718341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Zf-C2H2_ZNF451
Actin_micro
Zf-C2H2_ZNF451_C
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
DTHCT
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
116718341
NCBI-ProteinID:
XP_032416068
LinkDB
All DBs
Position
4:15825897..15833479
Genome browser
AA seq
754 aa
AA seq
DB search
MEGEVVSMESAQAAALGADGKVLPEGGEALIQAVQGEVAGDMNMMVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQAGATLGLGQLQLVQVPVTTTTVEGLQATFVE
ASGANKDAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHDELQATQEEEEEDDE
VVESEAAVPQQEDPEWSKDPDYQPITAIRKGKKGKKSRLRYAEGDRDMDVSVYDFEEEQQ
EGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERP
HKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKC
SMCDYSSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICH
ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYCD
AVFHERYALIQHQKTHKNEKRFKCDQCDYCCRQERHMIMHKRTHTGEKPFACSQCEKTFR
QKQLLDMHFKRYHDPNFVPTAFVCNKCSKTFTRRNTMLRHAENCMGEAGGDENGDPSPKK
GRRGRKRKMQSRRDDDDDDDDDNTEGELDEVEDEEDEMLDEIEVEQAEPVVPIPAPVEPP
VKRKRGRPPKNKPDPAAIIRVEDEVTGEVDDIIVKKEVGAEQEEGAMEEVVVGGVKSTIQ
LEELSQVEGAEVQMSEAPPNGDLTPEMILSMMDR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgtttccatggagtcggctcaggccgctgccctgggcgctgacgga
aaggtcctgccggagggtggagaagctctgatacaagcagtgcagggagaagtggccggt
gacatgaacatgatggtgatggacgcgctggatcccactctgctgcagatgaaaacagaa
gtgttggagggaggcggcacggtgacggttaccgggggagacgagggtcagatcatcaca
cttcaggtggtgaatatggaggagcaggccggtgccacgttaggtctcggtcagcttcag
ctggtgcaagtcccggtcacaacaacaactgtagaggggctccaggctacttttgttgag
gcatcaggagctaacaaggatgcagaacctgttatctgccacacccttcctttgcctgag
ggcttccaggttgtaaaagtgggagcgaatggtgaggtggagactgtagagcaggaagag
ctccaagcagcccacgatgaactccaagcaacacaggaggaggaagaggaagatgacgaa
gtggttgaatctgaagctgctgtccctcagcaagaagacccagagtggtcaaaggatcca
gattaccagcccatcactgctatccgcaaagggaaaaagggcaaaaagagccgacttcgg
tatgcagaaggagatcgggacatggatgtttctgtgtacgactttgaggaagaacagcag
gaggggctcctgtcagaggtcaatgctgagaaggttgtgggcaatatgaagcctccaaag
cccaccaagatcaagaaaaaaggtgtgaagaaaactttccagtgtgagctctgtagctac
acctgtccaagacgttctaatctggatagacacatgaagagccacactgacgagcggccg
cacaaatgtcacctgtgtggcagagccttcagaacagtcacgctgctgaggaaccacctg
aacacacacacaggcacccggccacacaaatgcacagattgtgacatggcgtttgtgacc
agtggagagttggtgcgtcatcgtcgctacaaacacacacatgagaaacccttcaagtgt
tcaatgtgcgactattccagtgtggaggtgagcaagttgaaacggcacatccgctctcat
actggggagcggccgttccagtgcagtctttgcagctacgccagcagagacacctacaag
ctgaaaagacacatgaggacacattcaggggagaagccgtacgagtgttacatctgccac
gcccgtttcacacagagcggcaccatgaagatgcacattctgcagaaacacacagaaaac
gtggccaagttccactgcccccactgcgatacggtgatcgctcgcaagagtgatctaggt
gttcacttgcggaagcagcactcgtttatcgagacggggaagaaatgtcgttactgcgac
gctgtgtttcacgagcgctacgctctgatccaacaccagaagactcacaagaacgagaaa
cgtttcaagtgcgaccagtgtgattactgctgcagacaggagcgccacatgattatgcac
aagcgtacacacacaggggagaagccatttgcctgtagccagtgtgagaagactttccgt
cagaagcaacttctggacatgcacttcaagcgttaccatgatccaaactttgttcccacc
gccttcgtctgcaacaagtgtagcaagaccttcactcgcaggaacacaatgctgcgtcac
gcagagaactgcatgggtgaagctggtggagacgaaaacggagacccgtctcccaagaag
ggacggcgtggcagaaagaggaagatgcagagcagaagggacgatgatgatgacgacgat
gacgataacactgaaggagaactggatgaagtagaagacgaggaagatgaaatgctagat
gagatcgaagtggaacaagccgaaccagttgtcccaattcctgcaccagttgaacccccg
gtgaagaggaaacgtggacgccccccgaagaacaagcctgaccctgctgccatcatccgt
gtggaggatgaggtcacaggggaggtggatgacatcatcgtgaagaaggaggtcggtgcg
gagcaggaagagggcgccatggaggaggtggtggttggcggcgtcaagtcgaccattcag
ttggaggagctatctcaggtagaaggagcggaggtgcagatgagcgaggccccgcccaac
ggagacctgacccccgagatgatcctcagcatgatggaccgatga
DBGET
integrated database retrieval system
