KEGG   Xiphophorus hellerii (green swordtail): 116718390
Entry
116718390         CDS       T07363                                 
Symbol
ercc5
Name
(RefSeq) DNA repair protein complementing XP-G cells
  KO
K10846  DNA excision repair protein ERCC-5
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    116718390 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xhe03400]
    116718390 (ercc5)
DNA repair and recombination proteins [BR:xhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     116718390 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 116718390
NCBI-ProteinID: XP_032416165
LinkDB
Position
4:21267902..21276836
AA seq 1070 aa
MGVHGLWRLLETTGKPTNPETLEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFN
RICKLLFFRIRPVFVFDGDAPMLKKQTLALRRQRKEELTTQSKQTNEKLLKTFLKRQAIK
AALGDHSKDPLPSLSSVKRNEVDDMYVLPALPPTEEKERSSSEEDEEGKDSDEMVETYQE
ELYENPNSVDINSEDFTSLPPEMKHEILKEMKEFCKRRRTMFNKPPERSGDFSQYQLAGL
LQRNRLNQRLEGVEKEMSQCSAGSAPQLGQQDEDQQNRSVESKRLVSEDNSHYILIKGSK
KNEPALQSQPAAAPWTSSRKRKADKPEPLWRPITEEEGDEEEDVRPTCSDAVNPPVSKPS
QPDTSPPSPRTLKAIQAAMSDSSDEEKLNPDSKDGKVSPRTLLAIQQALTEDEVSVSLSK
LQTSPQRPARRVVISSSNEETKPSLKEESDFSQSATDFRSAALRQNPTTAMESEVERVRE
GEKQKELEPREPEHKLHASQSNQELSISSPSLPSGKQASAETEQRLLDKSKHGLTGGLAK
ADRDDVKSGNSQQESDSEESFIEVSEEEFKQEDANDSAGEKRILEEVQEDETKTEEESEE
SLTQVVGHPALSSDKEDEEEGEQRKAQEKEVKDDMESKPTAENNEWEHLDMDELEALESS
LQLEQSNLREQKQQQERMANTVTGQMYLESQELLRLFGVPFLVAPMEAEAQCAALDRADQ
TNGTITDDSDVWLFGGRHVYRNFFSQNKYVEHYQYSDLQSQLGLDRTKMINLAYLLGSDY
TEGVAGVGYVTGMEILNEFPGPGLEPLIQLSNWWCEAQEKKRLTDNPRDTKVKKKLRELK
LQPGFPNPAVAQAYLQPAVDPSQASFSWGRPQLDMIKEFCLSRFGWSSRKTEETLQPVIK
QLNNQQTQLRIDSFFRLEQQEKQAIRSQRLRRAVTCMKRKEREGGEGESSEEELPSPSKS
RKGNLKNTEGQKEEEPPVAGGGFLAPKSNSESPFTSLRDFCSPGQESFTATAAHQSTKKL
PQKASRKSSSSSSEDSDEGRAVAMVTARSVFEANRRGRGGKRTRGRGKKL
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgggagtgcatggactttggagactcctggagactacaggaaaacccaccaaccccgag
acactggaaggaaagattcttgctgttgacatcagtatatggctgaaccaggcagtgaag
ggggtgagggaccgtgaaggcaacagcgtccagaacgcccacctcctcactctgttcaac
cgcatctgtaagctgctcttttttcgcattagaccggtgtttgtgttcgatggagatgct
cctatgctgaagaagcagaccctggctctgaggaggcagaggaaagaggagctgaccact
cagtccaaacagaccaatgagaaacttctgaagacctttctgaagagacaagctatcaaa
gctgcacttggagatcatagtaaggaccctctaccaagcctctccagtgtgaaaagaaat
gaagtggacgacatgtatgtcctacccgcccttccacccacagaggaaaaggaaagaagc
agctcagaagaggatgaggaggggaaagacagtgacgaaatggttgaaacataccaggaa
gaactgtatgagaatccaaactcggtggacataaactcagaggattttaccagcctgcct
cctgagatgaaacacgagatactcaaagagatgaaagaattttgcaaaagacgtcggacc
atgtttaacaaacctcctgagcgttccggagacttttcgcagtaccaactggctggcctg
ctgcagaggaaccggctgaaccagcgtctggagggagttgagaaggagatgagccagtgc
agtgccggcagcgctccacaactcggtcagcaggatgaggatcagcagaatcgcagcgtg
gagtcaaagcggctggtttcagaagacaactcgcactacatacttataaaaggctccaaa
aaaaacgaaccagccttacagagccaacctgcagctgcaccctggacaagttctagaaag
aggaaagctgacaaacccgagcctctctggcgacccatcactgaagaagaaggcgacgaa
gaagaggatgtacgacctacctgctcagacgccgtcaacccacctgtgtcaaaaccatca
caaccagacacatctccgccttcgcctcggacactcaaggcaatccaggctgctatgagt
gacagctcagatgaagagaagctgaatccagatagcaaggatggcaaagtgtctccacgg
acactcctcgcaatccagcaggcattaactgaggatgaagtaagtgtctcactgtccaaa
ctgcagacaagtccccagcgtcccgcgcggcgagtggtgatcagtagctccaatgaggag
acaaagccttcccttaaggaagagtcggacttcagtcaaagcgccacagattttcgctct
gcggcacttcgacaaaatcccacaacagcgatggagtcagaggtggagcgcgtcagggaa
ggggagaaacaaaaagagctggagccgagagaacctgagcacaagctgcacgcttctcaa
tctaatcaggagttatccatcagctctccttcgcttccaagtgggaaacaggccagcgca
gagacggagcagagactcctagataagagcaagcatggactcaccggtggcctggcaaaa
gccgacagagacgacgtaaagtcagggaacagccagcaggaaagcgactcagaagagagc
ttcattgaggtgtccgaggaagaatttaagcaggaggatgcaaatgattcagcaggagaa
aagaggattttagaagaggtccaggaagatgagacaaaaactgaagaagagtctgaggaa
agtttgactcaggttgttggtcatccagctctgagctcagacaaggaggatgaggaggag
ggagagcagaggaaagctcaggaaaaagaggtgaaggacgacatggaatccaaaccaaca
gcagaaaacaacgagtgggaacacctcgacatggacgagctggaggctctggagagctcg
ctgcagctggagcagagcaacctgagggagcagaagcagcagcaggagcggatggcgaac
acagtcacggggcagatgtacctggagagccaggagctgctgcggttgttcggcgtgccg
tttttggtggctcccatggaggccgaggctcagtgcgcggcgttggaccgcgccgaccag
acaaacggaaccatcacagacgactctgacgtgtggctgtttggaggacgacacgtttac
aggaacttcttcagccagaacaaatatgttgagcactaccagtacagcgatctgcagagc
cagttaggtctggacagaacaaagatgatcaatctggcttatctgcttggaagtgactac
acagagggtgttgcaggagtgggatatgttactggcatggagatactgaatgagtttcca
gggccaggactggagccactaatacagcttagtaattggtggtgtgaggctcaggagaag
aagcgtctgaccgataatcccagagatacgaaggtgaagaagaagctgagggaactgaaa
cttcagcctggcttccccaaccctgcggtggctcaggcttaccttcagcctgctgttgat
ccgtcccaggcctccttcagctggggccgcccccaactcgacatgatcaaagagttctgt
ctcagtcgttttggctggagcagcagaaagacggaggagactctccaacctgtgatcaaa
cagctcaacaaccagcagactcagctccgaatagactcattcttccgcttggagcagcag
gaaaagcaggcgatccgcagccagcgactccgccgagccgtcacctgcatgaagagaaag
gagagggaaggaggggaaggtgaaagtagcgaagaagaactgccttccccatccaaatcc
aggaaaggaaatctaaaaaacacagaaggacagaaagaggaggagcctcctgtcgcaggt
ggaggtttcttagctccaaagtcgaattctgaatctccttttacatccctcagggatttc
tgtagtccaggtcaggaatccttcacagcaacagctgctcaccagtctactaaaaaacta
cctcagaaggccagcaggaagagcagcagcagctccagtgaagacagcgacgaagggagg
gccgttgcgatggttacagcccgatctgtgtttgaggccaacagacgaggccgaggagga
aaacgcacaagaggaagaggaaagaagctttaa

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