Xiphophorus hellerii (green swordtail): 116718477
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Entry
116718477 CDS
T07363
Symbol
nfatc3
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
xhe04148
Efferocytosis
xhe04218
Cellular senescence
xhe04310
Wnt signaling pathway
xhe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116718477 (nfatc3)
04310 Wnt signaling pathway
116718477 (nfatc3)
04020 Calcium signaling pathway
116718477 (nfatc3)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116718477 (nfatc3)
09143 Cell growth and death
04218 Cellular senescence
116718477 (nfatc3)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116718477 (nfatc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116718477 (nfatc3)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
116718477 (nfatc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
116718477
NCBI-ProteinID:
XP_032416353
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Position
4:10583314..10648930
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AA seq
1092 aa
AA seq
DB search
MTTANCPGNEELDFRLIFGEDGQQQPLGPADLEPDDNTSFYILNMGQPQAMVTNHQSIGL
PRHGMHTHPQVISTSPRLPSHKIGTDLLSYEAQGSKYGTSPLLPSAPVEAPKAFECPSIQ
ITSISPSCQQELDASEGELTANGPDGDYHGDRPLSRDHLYLPLDHSYRDSSLSPSPCSSL
SSRSWFSDASSCESFSHVYDDVDSELNEAAARFSLGSPLTSPVCVSPQAVGGVLEEQSPW
QHHHPPFVHHSHSTLSPRQSPCHSPRNSVTDENWLSPRSPSRPSSRPTSPCGKRRHSSAD
ICYPGSLSPHHSPTPTPGHSPRGSVTEDTWAGSPTIGMSAFQCCPSETDIPSKTRKTSQD
RTSLQTGKGELALDDQENLSSNLDSPPDDTLHSMKKDGPAEQFLSVPSHFSWNKPKPGHT
PIFRTTSLPPLDWPLPSQFGQYELKIEVQPKAHHRAHYETEGSRGAVKAASGGHPIVKLT
GYNDKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEILLSSTKVLEIPLLPEN
GMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVLSLQAASIPV
ECSQRSAQELPQVEKSSLTSCLVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWEVEAK
IIREKTQGSCIVVEIPPYHSKTVTSAVQVQFYVCNGKRKRSQSQRFTYLSVMVKQEHRDE
LDLTAVPPISMPLAHAPSLVHPQLPSPDQGHPSDNLMSSSLHSLATGSGPGLLPLPGPCS
SLSSPPFQHLPHLQGHSLHHPPADCHMTFHQGSAPAPPRPTYQPLQHSPSHNLSFNGQPS
LSSQSYERMPFQQSPTAASHPIGLGIVYSSSCSSPSALSSSPTNPIVGSPQNHQPMLSPS
SPHLHTLGGFHCSPNPSQVPSQGGHPLSGQHSSQLQRGLGYHPVSQRSASCPTPSTAPQQ
RMIPSPHSGPSSPQVHPLPYQSPPSSSPTSAGSPLGPLQQHSGQPSPQATSPVMTSLSPA
AVGPLVHPLSPQGPFPSEGERLNIKQEPEEREPTFRSIGLQDITLDDVNEIIGRDMSQSP
SAHGPQSAHNHS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaaactgccccggcaatgaggagctggacttcagactgattttcggagag
gacgggcagcagcagcctttaggccccgcagatctggagcctgatgacaacacatcattc
tacatcctaaatatgggccagccccaggctatggtcacgaaccaccagtctattggcttg
cctcgtcatggcatgcacacccatcctcaggtcatcagcacttcaccgcgacttccatca
cacaaaataggaactgatctcctaagttacgaggcacaaggctctaagtatggcacctca
ccgttgctgccctctgctcctgtggaggcaccaaaagcctttgagtgccccagtatccag
atcacctccatctcccctagttgccagcaagagctagatgccagtgagggggagctgaca
gccaatggtcctgatggggattaccacggcgacagacccttgtccagagaccatctatat
ttgccactggaccactcatacagggactcttcgctcagccctagcccctgcagcagcctc
tcctctaggagctggttctctgatgcttcatcttgtgaatcgttttcacatgtctatgac
gatgttgactcagagctgaatgaagcagctgcaaggtttagtctgggctcccctctgact
tctccagtttgtgtgtcaccgcaggctgttgggggagttctagaggagcagtccccatgg
cagcaccatcatcccccctttgtgcatcactctcactccactctttctcctcgacagtcc
ccctgccattcaccacgcaatagcgtcactgatgaaaattggcttagtccacggtctcct
tccaggccctcttcgcgaccaacctcaccctgcgggaaaaggcgacactccagtgccgac
atttgctatcccggttccctgtctcctcatcactcacctacacccacgccaggacattcc
cccagggggagcgtgacagaggacacatgggctgggagtcccactataggcatgtcagct
tttcaatgctgcccatctgagacagacatcccatcaaagacaaggaagacctcacaggac
agaacatctctgcagacagggaaaggagagctggcattagatgaccaggaaaatctgtct
tctaaccttgattctcctccagacgacacgctgcacagcatgaagaaagatgggcctgca
gaacagtttctgtctgtgccctcgcacttctcatggaataaacccaagcctggtcataca
cctattttcaggacaacctcactccctcctttagactggccgttacccagccaatttggc
cagtatgagctgaagatagaggtgcaacccaaagcccaccaccgtgcacactatgagact
gaaggcagccgaggagctgtcaaagcagcatctggtggccatccaattgtcaagctcact
ggctacaatgacaagcctgtgaatctgcagatgtttataggaaccgcagacgaccgctac
ttgaggccacatgccttttaccaggtgcatcggatcaccgggaagactgtagcaacggcc
agccaagaaatcctgctttccagcaccaaagttcttgaaatccctctgcttcctgaaaac
ggcatgtcagccagtattgactgtgctggcatactgaagctgcggaactcggacatcgag
ctgcggaagggggagacggatataggacgaaaaaacacacgggtccgcgtggttttccga
gtgcacatccctcaacccaacgggaaagtgttgtccctgcaagctgcctctattcctgtg
gagtgctcccagcgttcagctcaggagctgccgcaggttgagaagtccagcctcaccagc
tgtctggtcagtgggggtgaggagatggtgatcactggttccaacttcttcccagagtcc
aaggttatcttcctggagaaaggccctgatggacgaccacaatgggaagttgaagcaaaa
ataattcgtgagaaaacccaaggttcatgcattgtcgtggaaatccctccataccacagt
aagactgtgacttcagctgtacaggtgcagttttatgtctgcaatggaaaacggaaaagg
agccaatcacaacgcttcacctacctttcagtgatggtgaaacaggaacacagagacgag
ctggacctcactgccgttcctcccatttccatgcccttggcacatgctcccagtctggtg
caccctcagctgccttctcctgatcagggccacccatcggacaaccttatgtccagctct
cttcacagcctggccacgggctccggacctggcctgctacctctgccgggcccctgttcc
tccctgagctccccgcctttccagcacctgcctcacctccagggtcacagtttgcaccac
ccccctgcagactgccacatgacgttccaccaaggctctgctcccgctcctccccggccc
acctaccagcctttgcagcacagtccgagtcacaacctgtccttcaatggccagcccagc
ctttcttctcagagctacgagaggatgccctttcagcagagccccactgcggcgtcacac
ccaataggcctgggaatagtttactcatccagttgctcctcaccgtctgccctttcatcc
tcacccaccaaccccattgttggatcccctcagaaccatcagcctatgctgtccccctca
tccccacacctccacacactcggaggcttccactgctctccgaatcctagccaggttccg
tctcagggaggccaccccctaagtgggcagcactcctcgcagctgcagagaggtctggga
taccacccagtaagccaaaggtcagcttcttgtcccacaccgtccactgccccccaacaa
cggatgatcccctctcctcattctggaccttcttctcctcaagtccaccctttgccctac
cagtctcccccttcatcctcccccacttcagctgggagtcctctggggcccctgcagcag
cattcaggacagccgtctccacaggccacgagtccagtcatgaccagcctgtcccctgca
gctgtggggccactggttcatccgctaagtcctcaggggccatttccctctgaaggggag
aggctgaatattaagcaagaaccggaggagagggagcccaccttccgctccatcggccta
caggatatcactctggatgacgtaaatgagatcatcggcagagacatgtcccagtccccc
agcgctcacggccctcagtcggcgcacaaccattcgtag
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