Xiphophorus hellerii (green swordtail): 116718547 Help Entry 116718547         CDS       T07363                                  Symbol ddb1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03420   Nucleotide excision repair xhe04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     116718547 (ddb1)   09124 Replication and repair    03420 Nucleotide excision repair     116718547 (ddb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:xhe04121]     116718547 (ddb1)    03400 DNA repair and recombination proteins [BR:xhe03400]     116718547 (ddb1) Ubiquitin system [BR:xhe04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      116718547 (ddb1) DNA repair and recombination proteins [BR:xhe03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       116718547 (ddb1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       116718547 (ddb1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Glyco_trans_4_2 Motif Other DBs NCBI-GeneID:  116718547 NCBI-ProteinID:  XP_032416474 LinkDB All DBs Position 4:6131535..6179397 Genome browser AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK IAVMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDL HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVTVMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHKQLIQITSGSVRLVV QDSKALVSEWKEPQGKNISVAACNHTQVVLAVGRALYYLQILAGELKQISTIAMEHEVAC LDITPLGEGGNESTLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSY YLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRRICYQEVSQCFGVLSSRVEIQDVSGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHET SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYSLSIVSCRLGKDPSVYFIVGTAMVYPEE PEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLTKVIKSVGKIEHSFWRSFHTER KTEQGTGFIDGDLIESFLDLSRAKMQEVVSTLLIDDGSGMKREATVDEVIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcttataactacgtggtaacagcgcagaagcccacggcagtgaacgcctgtatcaca ggtcacttcacctctgctgaggaccttaatttgctcatcgctaaaaacacacgtttggag atctatgtggtcacagctgagggacttagacctgtcaaggaagttggcatgtatggcaaa attgctgtcatggagctcttccgtccaaagggtgagagcaaagacctgctgttcattctc acatccaagtacaacgcatgtatcctggaatacaaacagaacggggagagtattgacatc atcacccgtgcccatggcaacgtccaggatcgcattggacgtccatcagaaacagggatt attgggattgttgacccagaatgccgcatgatcggtctgaggctgtacgacggattgttc aaggtgatcccgttggaccgggacaatcgagagctaaaggcgttcaacatccggctggag gagctgcaggtcatcgatgttcacttcctgtatggctgccaggctccaaccgtctgcttc atctaccaggaccctcaaggacgtcatgtaaagacgtacgaagtttctctgagagagaag gagttcaacaagggcccctggaaacaggagaatgtcgaggctgaagcatccatggttatt ccagtgccggagccatttggtggcgctataatcataggacaagagtcaatcacctaccac aatggggacaaatacctggccattgccccaccaacaatcaagcaaagtaccattgtttgc cacaaccgggtggaccccaatgggtcgcgctacctgctgggagacatggagggtcgtctg ttcatgctgctcctggagaaggaggagctaatggacggcaccgtggctctgaaggacctg catgtagagcttctgggagagacctctatagctgagtgtttgacctacctggacaatggt gtggtgtttgttggatccagattgggagactcccaacttgtgaagcttaacgtggacagc aatgagcagggctcctacgtcacagtaatggagacgttcaccaacctggggcccattgtg gatatgtgtgtggtggacctggagagacagggtcagggccagctggtgacatgctctgga gcgttcaaggagggttctctgcggatcatccgcaatggcattgggattcacgagcatgcc agcatcgacctgccgggaatcaaaggtttgtggccacttcgctctgaggcaggccgggag acagatgatatgttggtactgtctttcgtgggtcagacgagagtgttgatgctgagcgga gaggaagttgaggaaaccgagctgccaggttttgtggacaaccagcagacattttattgt ggaaatgttgcacacaaacaactcattcagatcacatcaggctctgtgcgcttggtggtc caggacagcaaggccttggttagtgaatggaaagagccgcagggcaagaacatcagcgta gctgcctgcaatcacacacaagtggtgcttgctgtgggacgagccctgtactacctgcag atcctcgcgggagaactcaaacagatcagcaccatagcgatggagcatgaggtggcctgc ctggacatcacacctctcggggagggtggcaacgagtccacgctctgcgctgtgggacta tggaccgatatctctgcacgtgtgctcaaactgccctgtttcacggctctgcacaaggaa atgctgggcggagagatcatccctcgctccatcctaatgaccacctttgaaggcagctac tacctgctgtgtgccctgggagatggagcactcttctactttggtcttgacctacagacc ggggccctcagcgagcgtaagaaggtcactcttggcacgcagcccaccgtgctgcggacc ttcagatcgctgtccacctcaaacgtcttcgcctgctccgaccggcccactgttatctac tcgtccaaccacaagctggtgttttccaacgtaaatctgaaggaagtcaattacatgtgc ccactcaactctgagggctacccagacagtctggctttggctaacaacagcacactgacc atcggcaccattgatgaaatacaaaaactccatattcgcacagttcccctctacgagtct ccaaggcggatctgttaccaggaggtttcgcaatgtttcggggttctgtccagccgggtg gagatccaggatgttagcggcaccacgtctgctgtacgacctagtgcaagcacacaggcg ctctccagcagcgtgagctccagcaaactcttccccagcagcacttctccacatgagacc tcctttggtgaggaggttgaggttcacagtctgctcgtcgtggatcaacacacctttgaa gtccttcatgcccatcagttcctccccagcgagtattctctcagcattgtgtcatgtcgt ctgggaaaagacccatctgtttacttcatcgtcggcacggccatggtttacccagaggag cccgagcccaagcagggtcgaatcattgtcttccattacaccgacgggaagctgcaaacc gtggctgagaaggaagtgaaaggagctgtctattctatggtggagttcaatggaaaacta ctggccagcataaatagcacagttcgtctgtacgagtggacggccgagaaggagctgagg accgagtgcaaccactataacaacatcatggcactatacctgaagaccaaaggggatttc atcctggtgggagacctgatgaggtctgtcctgctgctggcgtacaaacccatggagggc aactttgaagagattgcccgtgattttaatccaaactggatgagtgccgtggaaattcta gacgatgacaacttcctgggagcagagaacgcctttaacttgttcgtctgccaaaaagat agtgcggccaccaccgacgaggagcgccagcatcttcaggaggtcggggtctttcaccta ggcgagtttgtaaatgtcttttgccatggctcactggtgctacaaaacctgggggagagc tccacacccacccagggatccgtactctttggcaccgttaacggcatgatcggtctggta acgtctctgtccgagggctggtacagcctcctgcttgacctacagaaccgcctcaccaaa gtcatcaaaagcgtgggcaagatcgagcacagcttctggaggtctttccacacggagcgc aagacggagcagggcacaggcttcatcgacggggacctgattgaaagcttcctggatctc agtcgggcaaagatgcaggaggtcgtcagcactctactgatcgatgatggcagcggcatg aagcgtgaagccacggtggatgaggtgattaagatcgtagaggagctgacgaggatccac tag

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