Xiphophorus hellerii (green swordtail): 116718565
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Entry
116718565 CDS
T07363
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04137
Mitophagy - animal
xhe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116718565 (usp8)
04137 Mitophagy - animal
116718565 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116718565 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116718565 (usp8)
04121 Ubiquitin system [BR:
xhe04121
]
116718565 (usp8)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116718565 (usp8)
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116718565 (usp8)
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Others
Others
116718565 (usp8)
Ubiquitin system [BR:
xhe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116718565 (usp8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
116718565
NCBI-ProteinID:
XP_032416520
LinkDB
All DBs
Position
4:23980083..23995187
Genome browser
AA seq
1080 aa
AA seq
DB search
MPAVSTGAKELYLSTSLGDLNKKAEIKPDKTSTRSYVQSACKLFKAAEECRLDRDEEKAY
VLYMKYLTVYDIIKKRPEFKQQPDYYMTMLGANSFKKAIEEAEKLSESLKLRYEEVEVRR
KLEEKERLEEKKKKEEVTEKDGRNSPKASTINKKDSKKAKGEQNELKSVITKAAQPAGGI
TAEKLFNMMKDQTISVLVMDARSHRDYEESHMQVPAQTCISVPEEAVSPGITVTLIEAKL
PDASKDHWRRRGVVDYVVLLDWFSSASDLKLGTTLMSLKDAIYKWDSLTIMRSEPLVLEG
GYENWLLFYPMYTTNAKVRPPRQTITNSLPQLNFSYPSLEEPKPPTPTPPEREISPEPQE
PAAPALVNGVSPAEPPASKTSVVADRLPDTVDLPITVPTNSGLDLSKKDPAVSQSPTTAR
VFPQYDRAKKPSVPVSDQTKSGQNRSAIDSSQNGPIIPDRSAKPPLSSGGSLSKDEQQQI
HSEAVAVMEKAKQEQEKRNQERRLEEERREKEQKEREESEKRKKEEEEKRHQEKKRLERQ
TAEEEEDKEKKVWDDRERRGKEQNPDTPSKSMSLDSPAPNHIVSEIKREPLTRARSEEMG
RSVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTAKPRSQKPAE
PDTSHDREREQSKLKRSYSSPDISQEVSEEAQKKTTAPTAAAVIPTINRETKPPSVKVYS
KVESVRPSAAKLRNLNPSFGGLGASLTGLRNLGNTCYMNSILQCLCNTPRMADYFNNNLY
LEDINRSNILGHKGEVAEEFGVIMKALWAGLYKCISPRDFKSTIGKINDQFAGYDQQDSQ
ELLLFLMDGLHEDLNKRADNRKRYKEEENDHLDDQNAANVAWNKHKLLNESIIVALFQGQ
FKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCK
AHRDSTKKLEIWKVPPIVLVHLKRFSYEGRWRQKLQTSVDFPLDSLDLAQYVIGPKQNLR
RYNLYAVSNHYGGLDGGHYTAYCKNSLKQRWYKFDDHEVTEISSSSVKSSAAYILFYSTL
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtctccacaggggccaaggagttgtatttatccacatctctaggcgacctc
aacaaaaaagctgaaattaagccagacaaaacgagcaccagaagctatgttcagagtgcc
tgcaaactgttcaaggcggcagaggagtgtcgtcttgacagggatgaggagaaagcttat
gtgctgtacatgaagtacttgacggtttatgacatcataaagaaaaggccagaattcaag
cagcaaccggattattacatgactatgcttggagcaaatagcttcaagaaagccattgaa
gaagccgagaagctgtctgaaagccttaaactcaggtatgaggaagttgaggtgcggaga
aagcttgaggagaaggagcgattagaggagaagaagaaaaaggaggaagtaacggagaaa
gatggtcgaaattctccaaaagcctcaacaataaacaagaaggacagcaaaaaggcgaaa
ggagagcagaatgaactgaaaagtgtcatcactaaagctgcacaaccagcaggtggcatc
acagctgagaaactttttaacatgatgaaagatcagaccatatcagtactggtgatggat
gctcgcagtcacagagactacgaggagtctcacatgcaggtcccggctcagacctgcatc
agtgtgccggaggaggccgtcagcccaggaatcactgtgactctgattgaggcgaagttg
cctgacgcatctaaagatcactggagaaggcgaggagttgttgactatgtggttctgctc
gactggtttagttctgcatctgaccttaaattaggcaccactttgatgagtctaaaagac
gccatttataagtgggacagcctaaccattatgcgtagtgagccactggtgctggaggga
ggctatgagaactggctgctgttttatccaatgtatacgaccaacgctaaagtccgaccg
ccgaggcaaacgatcaccaacagcctaccacagctgaactttagctacccgtctttggag
gaaccgaagcctcccactccaactccacctgagcgagagatttcacctgaacctcaggaa
ccagcagctcctgctctggtgaacggcgtctcacccgctgagccgccagcatccaaaacc
tccgtggttgctgacaggttgccagataccgttgacctcccgattacagtacctactaat
tctggtttggacctgagtaagaaggatcctgcagtcagccagtcgcctacaactgccaga
gttttcccccagtatgacagagccaagaaaccgtctgtcccggtgtccgatcaaaccaag
agcggccagaaccggtctgcgatagattcatcccagaacggccccatcatccctgaccgc
tcagctaaacctccactcagctccggcggttctctgtccaaagacgagcaacaacagata
cactccgaggcggtggccgtgatggagaaggccaaacaggaacaggaaaaacgcaaccag
gagcgccgcttggaagaggagcggcgggagaaggaacagaaggagagggaggaaagtgaa
aagaggaagaaggaggaagaggagaaaagacatcaggagaagaagagactcgaaaggcag
acggcagaggaagaggaagacaaagagaagaaagtatgggacgacagagagcggaggggg
aaagaacaaaacccggacacgccttcgaagagcatgtctctggattctcctgctcccaac
catattgtgagtgaaatcaagagggagcctctgactagagcaaggagtgaggagatgggt
aggagtgtgccaggcctccctgatggttggatgaagtttttggatacagtgactgggacc
tacagatactaccactcccctacaaaccgcgtccacctttaccctcccgaggtcaccgtc
cctcagaccccaccgtccaccccgccgaccgccaaacctcggtcccagaagcctgccgag
cctgacacgagccacgaccgagagcgggaacagtccaagctgaaacgttcctactcttct
ccagacattagccaggaagtgagcgaggaggcgcagaaaaagacgaccgctccaaccgct
gctgcagtcatacccaccatcaacagagaaaccaaacctcccagtgtaaaggtttactct
aaagtggagagcgtgcggccgtctgcggctaagcttcgcaacctgaatccctccttcgga
ggcttgggcgcatcgctgactggccttcgaaacctaggaaacacctgctatatgaactcc
atcctgcagtgtctctgcaacactcctcgcatggccgattacttcaataacaacttgtac
cttgaagacatcaacaggtccaacattcttggccataaaggggaggttgcagaggagttt
ggagtgataatgaaagcgctgtgggccggtctgtacaagtgcatcagtccgcgggacttc
aagagcaccataggaaagatcaatgatcagtttgcaggctatgaccagcaggactcccag
gagctgctcctgttcctgatggacggcctgcatgaagacctcaacaagagagccgacaac
aggaagcggtacaaggaggaagaaaacgaccacctggatgaccagaacgcggccaacgtg
gcctggaacaagcacaagttgctgaacgagtccatcatcgtggcgctgttccagggtcag
ttcaagtccacggtccagtgtctgacctgccatcgcaaatcacgcacctttgagaccttc
atgtacctgtcgctgcctctggcctccaccagcaagtgctccctgcaggattgtctaagg
ttgttctctaaagaggaaaagctcaccgacaacaacaaggtgttctgcagacactgcaaa
gcccacagagattccaccaagaagctggagatctggaaggttcctcctattgtcctggtt
cacttaaaacggttctcctatgaaggccgatggaggcaaaaactacaaacatctgtcgat
ttccctctagacagtctggacctggcccagtatgttatcgggcccaagcagaacctgagg
agatacaacctttatgccgtgtctaatcactacgggggcttagacggcggccactacacg
gcctactgtaagaactccctcaagcagcgctggtacaagttcgatgaccacgaagtgacg
gaaatctcctcgtcttcggtcaagtcgtccgcagcctacatcctgttttactccaccctg
tga
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integrated database retrieval system
