Xiphophorus hellerii (green swordtail): 116718583
Help
Entry
116718583 CDS
T07363
Symbol
map1a
Name
(RefSeq) microtubule-associated protein 1A isoform X1
KO
K10429
microtubule-associated protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116718583 (map1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116718583 (map1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116718583 (map1a)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116718583 (map1a)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
116718583 (map1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-GeneID:
116718583
NCBI-ProteinID:
XP_032416557
LinkDB
All DBs
Position
4:complement(2415186..2454905)
Genome browser
AA seq
2568 aa
AA seq
DB search
MVLAPDAVVMEMGESSASAAGAVTMETSGSAERAEPDRIDVPAVRNRNYRVLIAIGEIST
DYHLEAARSQITGGLLSWNVDLSVCDLNKELQLFRNRHTAQFSPQVKGQRTLRYQSDVLQ
TVVLVNPAQEAVSLETTALITDTATNKLLILSGQSSDQGGDILLQSGVFGWQQFSDIISN
PQVIEVLSRASSQLLSRLTVSCQGDGGWSSLGQGQEQQPLLNILEYCLNPEPQLPKMDGV
TEFTEYVSETVDVPSPFELLEPPTSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNILVDG
GSERKSCFWKLVRHLDRIDSVLLTHIGADNLPGINGLFQRKIAEQEEEKNQGSGSSSNGD
WMKNLISPELGIVFFNVPEKLKMPESTLKVKRSIEEASLTLQYLNKLGITPEPLHRIVSN
TIEPITLFHKLGVGKLDMYVLNPVKESKEMQFLMQKWAGNSKAKTGIMMPNGKEGEISVP
YLTSVTALIVWIPHRPTEKIVRVLFPGNAPQNKIFEGLEKLKHLDFLRYPVATQKDISSG
APPPIIKQTKIRSRTESKESLKSSPKPHAKASKKEASRQEEESRSDATKENKVEKKEEKK
PKSNNLKATKQQKNSEVAPGTEKTAKKKISKEKSSKQEKASKMDEKKDKEKKDTKKEKVK
KDEKIRKEDKKESKAKEDKKKEPSKPELRKITKPDLKPLTPEVRKTLHKAKSQAKSKTDK
NKAAKEETNGKKPVPKNILDEVAAAALADRSIVSSPEDLTEDFEALKQEEMSIQKTGSVQ
NDAMPEPPAHLDTKVSPQAVTSEKLTSSTTEIKPTGSKSPVIQEDKNDKQVTASQLKDVS
HGFDKKYEEEKMEKYDFLKENVTDRSKKSESSEEEGDVIEKAELEGTEDDEVLKFKTEEV
KPTKPTTAAPLPASASEQFSFIQDETIPGYSETEQTISDEEIHEETEDKIPQLRYDVGSY
DISVPDVPGTFESMHGIKEMKSSAVSDVADVKPKAFGQEPELAPYPAIIAAPLAEEEHIS
SATSITDYDRLSSFATSVAEDQSIASVTAPQTEDVVRNSLLLDTVNSAPSRAEAAQGKDY
LHSAGTISPTSSLEDDKCFKSPSSDEYQPNIPEIESDAKTKTVHEEEEDEEEEDEDQTPN
VDIPLGKLQEGYEQAASLMHQEQQKYPSTVIPAQTVKEDQTLLGTEAFKTAADVKPISPP
PSFSPGLESRSRQDSEERCFSPDDSTMKLASPTQSVPTSSGYSPTEEKPFKPEEKDEALH
AIKADAQKTDRSVTISDNTSFIGLPGDKTAFEASEESDEDSEDDYYTKKELKPTLKAKLM
EAKEGCFLDDDFSFEGKPAKTESEALSSDKTQVSFSTTDKPKPKVMFSDEDEKDDDFPGG
LGSKTLSDEKDKGETTDVEIKESEKSVHFSLYEYPEKESRESRERAVYTRQDTPYVHGKT
FSYGDIYDSKTSSEESDLYREESQEKVEEKPTKDEEDLHTHEPPSQDTVSDKVLEKEQRD
YSSSSWLEPKSTSVTDQFKTDVKEKETFIYSQTSRFPSVADRPEASTTRLSSEKDQTLGS
TPPTFSSVISSVPSASGYSEKGACLEIDMRKLTARDEEDYDDEVIDDNDEEEEDEEEEDE
DGIDSDMEKGAKEKSEKEVQSPVSQMLASKRPEFMVSMAGYGYNSQGKLSITETSSSSVT
KAEYQAQADSSCVSEKPVDVGATNLSSYSSGFEDPYRTDEKESFLSSQSGDKEKEDFSSK
SRVDSYYQSETVDTEFEKQKTPDILSKSSLEANFQYTTTAAAPGYSSSSAYSYSSSTSGS
LSTSRQFGEELETPASAEPLFEYSSFKDEHSLVMDSPFSSSAGAKDDYLEVSEKQITVAT
TAESSSSLARFSPLSPFEEVKSFPTASSVAAVQEKKEHVTPLCGVTDKGPQADCFFKPEW
PEDTKLDTAAGFGASAGPFADLSMNKEAASAALFGVTSSPRPDIEGKHYFEETDSSEEED
EETYMREMTQRSPSSAPAGSLPFCDKPAAPAFSAKTSDALPDVLGSYMSTPLQTSKPDTT
NGPTEVSTRSPLPTGVTGAGAPSGSARVESREGATGYVRSSYEWEMPKPQMGMVPGDSPP
HYRHDDEFEEECEMEPEHPPRPLSLASPDQQFRSPFYAEECSRGEQEDDDDDSDQELPIG
ATSSYTSRTSPGYSSSEFRQRKEDLSPSFINPCMRRLSSDEDNEEEGCRSDQSQEGDEHD
LSVKRRAHKQPHTHQSHSRDSSSLHQSGGMPAGMCLATEDTPPTSVSESLPSQSESDLHP
GTAEYPSITGEGNMDSDEDGEYMPIDKSATGRGSHHSTSRRSHDPPPAPLLDRFPHPPHP
DVCMVDPDSLGNGSLKKEPKAKSLKKSSGKTKSASPARRKRSPMPVKQTPSPRSASLKKK
DADKSSRMSRLSDGQGSKDDDLSRSSYNPSKGLTNGVKTSSGSQKSGTAAAPGLPIYVDL
AYIPNHCSAKNVDQEFFKRIRSAYYVVSGNDATGGEPGRAVLDALLDAKAQWGSNLQVTL
IPTHDTEVTRDWYQQTHERQQELNIMVLASSSTVVMQDESFPACKIEF
NT seq
7707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgctccggatgcagttgtcatggagatgggagagagctcggcgtccgctgcc
ggcgctgttaccatggagacctccggctcggcggagcgggcagaaccggaccggatcgac
gtcccggcggtccggaacagaaactaccgggtgctgatcgcgatcggagagatttccaca
gactatcacctggaagcggcgcggagtcagatcacaggaggtctgctttcctggaacgtt
gacctgtctgtctgcgacctgaataaggagctacagctgttcaggaacagacacaccgct
cagttttctcctcaggtcaaaggtcagagaacgctgcggtaccagagcgacgtcctgcag
acggtggtgctggtgaacccggcacaggaggcggtttctctagagacaactgctctgatc
actgacactgctactaataagttgctaattctgagcggccagagctccgaccagggaggc
gatattcttctgcaaagtggagtcttcggttggcaacagttttctgacataatctccaac
cctcaagttattgaagtcttgtccagggcctcctcgcagctgctgtccaggcttactgtt
tcctgtcagggagacgggggctggagctccctgggccaaggccaggagcagcagccactg
cttaatattctcgagtattgcttaaacccagagccccaactccccaaaatggacggggtc
acagagttcacagagtatgtctcggaaacggtggatgtaccatcaccctttgagcttctg
gagccgccgacctccggtgggtttctaaagctgtccaaaccctgctgctacatattccct
ggaggcaggggggactcagctctgttcgccgtcaatggattcaacatcctggtggacggc
gggtcagagaggaagtcctgcttctggaaactagttcgacacctagacaggatcgattcc
gtcctgctcacccacattggtgcagacaacctaccgggcataaatgggctgttccagaga
aaaattgcagagcaggaggaagagaaaaaccaagggagtggctccagtagtaatggtgac
tggatgaagaacttgatctcccctgaacttgggattgtatttttcaacgtcccagagaag
ctaaagatgccggagtctactctcaaggtaaagcggagcattgaagaggcatctctcact
ctgcagtaccttaataagcttggcatcactcctgaacctcttcacaggatagtcagtaac
actattgaaccaataacactgttccacaaacttggtgtgggaaagttagacatgtacgtc
ttaaaccctgtgaaggaaagcaaagaaatgcagtttctgatgcaaaaatgggcagggaat
agcaaagccaagacaggaatcatgatgcccaacgggaaggagggagaaatatctgtgccc
tatttaacgtcagtcactgctctaattgtttggatcccacatcgacccacagaaaagata
gtgcgtgtgctgtttcctggaaatgcaccacaaaataaaatttttgaggggcttgagaag
ttgaaacatctggacttcctgcgatacccagtggccactcaaaaagacatatcatctggc
gcgccacctccaatcatcaagcaaactaaaataaggtccagaacagagagcaaagagagt
ctcaaatcttcacctaaaccccatgctaaagcatctaagaaagaagccagcaggcaggag
gaagagtcaagaagtgacgccactaaagagaataaagttgaaaagaaagaagagaagaag
cctaaaagtaataatttaaaagccaccaaacagcagaaaaacagcgaagtggctcctgga
accgagaagactgcaaaaaagaaaatttccaaggaaaaatcttcaaaacaagagaaagca
tctaaaatggatgaaaagaaagacaaagagaaaaaagacaccaagaaagaaaaggtaaag
aaagatgaaaaaataagaaaggaagacaaaaaagagagtaaagcaaaggaagacaagaag
aaggagccaagtaaaccagagcttagaaaaatcaccaaacccgacctgaagccgctcacc
cctgaagtgagaaaaacgctgcacaaggccaagagccaggcaaaatccaaaactgataaa
aataaggctgccaaagaggaaacaaatgggaaaaagcctgttccaaagaacatcttggat
gaggttgcagcggcagctttggctgacaggtccattgtctcctcacctgaggacctcact
gaggactttgaggcactcaaacaagaggagatgtccatccagaagactggatctgtccag
aatgatgcgatgcctgaacccccagcacacctagacactaaggtttctcctcaagctgta
acaagtgagaaactaacatcctcaaccactgagataaagcctactggatctaaatcccct
gtcatccaagaagacaaaaatgacaaacaagttactgcttctcaactaaaagatgtgagt
catggctttgacaagaagtatgaggaggagaaaatggagaaatatgactttttaaaagaa
aatgtgactgacagatcaaagaaaagtgagagctcagaggaggagggtgatgtgatagaa
aaagcggaactagaaggaacagaagatgatgaggtcttgaaatttaaaacagaggaggtg
aaaccaactaaaccaacgaccgcagcgcccctaccagcctctgcctctgagcagttctcc
ttcatccaagacgagaccatccctggttactcagagacggagcagacgatttccgatgag
gaaatccatgaggaaactgaagacaagattccacaactgcgctatgatgtgggctcctac
gacatttctgttccagatgttcctggtacgtttgaatccatgcatggtattaaagagatg
aaaagctctgcagtttctgatgttgcagatgtcaaacctaaagcttttggtcaggaacct
gagcttgcgccataccctgccataattgctgctcctcttgcagaagaagagcatatctct
tctgcaacatctatcacagactatgacagactgtcatctttcgccacatctgtggctgag
gaccaatcaattgcctcggtgacagcacctcaaacagaagacgttgtgaggaattccctc
ttgttggacaccgtcaacagcgctccatcacgtgcggaggctgcccaagggaaagactat
ctccattcagcaggcaccatatcccccacatcctctctggaagacgacaagtgctttaag
tctccgtcctctgatgaataccagcctaacattccggagatagagagtgatgcaaagacc
aaaaccgtccatgaagaagaagaagatgaagaagaggaggatgaggaccaaactccaaat
gttgacatccctctgggtaaacttcaagagggctatgaacaagctgcctcactgatgcac
caggagcaacaaaaatatccctctactgtcattcctgcgcagactgtcaaggaagaccag
actctcctcggcacagaagcgtttaagactgctgctgatgtaaagcctatctcaccccct
ccatctttctcccctgggctagaatcccgatccaggcaggacagtgaggagagatgcttt
agtcctgatgacagcaccatgaaattggcttcacccacacaatcagtgcccacaagcagt
ggttactctccaacagaagaaaaaccctttaaaccagaggaaaaagatgaagcactgcat
gccattaaagctgacgctcagaaaactgaccgatcagtcaccatctcagacaatacctcc
tttattggcttaccaggcgacaagacggctttcgaagcatcggaggaatctgatgaggac
agtgaggatgactattacaccaaaaaggagttaaagcccactttaaaagctaaactcatg
gaagcaaaagaaggttgctttttagatgacgacttttcattcgagggaaaacctgcaaag
acagaatcagaagctctgagttcagacaagacgcaggtgtcctttagcacaacggacaaa
cccaaaccaaaagtgatgttttctgatgaagatgaaaaagatgatgattttccaggtggg
ttaggttctaaaaccctttcagatgaaaaagacaaaggtgagacaacagatgttgaaatt
aaagagtcagagaaaagtgtccatttcagtctttatgaatatccagagaaagagagcaga
gagagcagagagagagcagtgtacacaagacaggatacaccatatgttcacggaaaaaca
ttctcttatggtgatatttacgacagcaaaacaagctcagaggagtctgacttgtatcga
gaggagtcccaagaaaaggtagaagaaaaacctacaaaggatgaagaagatttgcacaca
catgagcctccatcacaggacacagtatcggacaaggttttagagaaagaacaaagagac
tactcctcctcttcatggctagagcccaagagtacatctgtcactgatcaatttaaaaca
gatgttaaagaaaaagagacatttatttacagtcagactagtcgtttcccttcagttgct
gaccgacctgaagcctcgaccacacgtttgtcgtcagaaaaggaccaaactcttggctca
acgcccccaacattctcctcagtcatttccagcgtcccttctgcatcaggctacagtgag
aaaggggcctgcttagagattgatatgcgaaagctaacagcaagagatgaggaagattat
gatgatgaagttatcgatgataacgatgaggaggaagaagatgaagaggaggaggatgaa
gatggcattgattctgacatggaaaaaggtgccaaagagaaatctgaaaaggaagtacaa
agtccagtaagtcaaatgttagcctcaaagagacctgagtttatggtttctatggcaggg
tacggttacaacagtcagggaaagctgagcatcacagaaaccagctcaagttcagtaact
aaagctgaatatcaagcccaggctgactcctcctgtgtcagtgaaaagccagtggatgta
ggagctaccaatttatctagttactcttcaggttttgaagacccatacagaaccgatgaa
aaagagtcatttctgtcaagtcagagtggagacaaagaaaaagaagatttctcttcaaaa
tcgagagtagacagttactaccaaagcgaaacagttgatactgaatttgagaaacagaag
acaccagatattttgagtaagagctcattggaagcaaactttcagtacacaaccacagca
gctgcccctggctactcctcatcttcagcctacagctactcctcctccacctcaggctcc
ctctccaccagccggcagtttggagaggagctggagacacctgcgtccgctgaacctctc
tttgagtactcctcatttaaagatgaacactcgcttgttatggattctcccttctccagt
tcagctggtgccaaagatgattatcttgaggtgtctgagaagcaaatcactgtagcaaca
acggcagagtctagttccagtttagctcgcttctcacctcttagtccttttgaggaagtc
aagtccttcccaacggcctcatctgtcgccgctgttcaagagaagaaggaacatgtaact
ccattatgtggagtcactgataaagggcctcaagctgactgcttctttaaacctgagtgg
cctgaagataccaagttggacacagctgctgggtttggggcctcagcgggtccctttgca
gacttgtctatgaataaagaggccgccagtgctgctctgtttggtgtcacttcctctcct
cggcctgacattgaaggaaagcattactttgaagagactgacagcagtgaagaggaggat
gaggagacatatatgcgtgaaatgactcagaggtctccttccagtgctcctgctggtagt
ctcccattttgtgacaagccagctgctccagccttcagtgcaaagacaagtgatgcactt
ccagatgttcttggctcttacatgtccacacctctccagacaagcaagccagacacaaca
aatggcccaacagaggtaagcaccaggagcccccttcctactggggtaacaggagctgga
gcaccttcaggctcagccagagtggagtctagagagggagcaacagggtacgtccggagt
tcatatgagtgggaaatgcccaagcctcagatggggatggtacctggagactcccctcct
cattaccgccatgatgacgagtttgaggaggaatgtgagatggagccggagcatcctcct
cgcccactttcacttgcttcacctgatcagcagttccgctcaccgttctatgcagaagag
tgcagccgaggcgagcaggaagatgatgatgatgacagtgatcaggaattacccattgga
gcaacctcttcttacaccagccgcacctctcctggatactcttcctccgaattcaggcag
cgcaaagaagacctgtcaccgtccttcatcaacccctgcatgaggcggctttccagtgac
gaggacaatgaggaggaaggctgcaggagcgatcagtcacaggaaggagatgaacatgac
ctgtcagtcaagaggagggctcacaagcaaccccatactcaccagtcccacagcagggac
agtagctctctgcatcagtctggtggtatgcctgcagggatgtgtctggccacagaggac
actccgcccacctctgtcagcgagtctttaccttctcagtcagagtcagatctgcatcct
ggcactgcagagtacccatcaattacaggtgaaggcaacatggactcagatgaggatgga
gaatacatgccgattgataaatctgccacagggcgaggtagccatcattctacctccagg
agaagccatgaccctcctcctgctcccctcctggaccgcttccctcatccaccccaccca
gatgtctgcatggtggatcctgactctctaggcaatggctctctgaaaaaggaaccaaaa
gcaaaaagtctgaagaagtcttcaggcaaaacaaaatcagcatctccagcaaggcgtaag
aggtccccaatgcctgttaaacagacgccgtcacctcggagtgcttcgctgaagaaaaag
gacgcagacaaaagctcacgcatgtctcgtctatcagatggacaaggctccaaggacgac
gacctctcaagatcaagctacaaccccagtaaagggctgacaaacggggtcaaaaccagc
tcaggttcccagaagtccggcacggcggccgctcccggccttccaatttatgtggatcta
gcctacattcccaaccactgcagtgctaagaacgtggaccaggagtttttcaaacgcatt
cgctctgcgtactatgtagtgagcggcaacgacgctacaggaggcgaacctggccgagcg
gtccttgatgctttgctggatgccaaagctcagtggggatcaaacctgcaggtgactctg
atcccaacccacgacacagaggtgacgcgcgactggtaccagcagacccatgagaggcag
caggagctgaacatcatggttctggcctccagcagcaccgtcgtcatgcaggacgaatct
tttccagcctgcaagatcgagttttag
DBGET
integrated database retrieval system
