Xiphophorus hellerii (green swordtail): 116718624
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Entry
116718624 CDS
T07363
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116718624
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xhe01007
]
116718624
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116718624
Enzymes [BR:
xhe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
116718624
Amino acid related enzymes [BR:
xhe01007
]
Aminoacyl-tRNA synthetase
Class I (G)
116718624
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116718624
Prokaryotic type
116718624
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
116718624
NCBI-ProteinID:
XP_032416657
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Position
4:1558950..1574681
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AA seq
865 aa
AA seq
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MSSSPDTEDEDSCSCSAANVCPLVSAAFEFGSLLQINEEAALTAALNDYLTSRSYLAGFG
PSQADLRAFRLLPQPPAPQHVHALRWYRHISALQQDLSADGSMKGKRVQPPWSPPAGTEV
PQLRLYNSLTRTKEPFVPQKGNKVTWYSCGPTVYDASHMGHARSYISFDILRRILRDYFK
YDVLYCMNITDIDDKIIKRARQNFLLERYREKRPQAAQILQDVLNARVPFREQLASTTDP
DKKQMLERLDDAVAGALQPLQVAMESNAAADVLQPLTEVLLENSKDLLSDWLDRQFGSEV
TENSIFSVLPKFWEGEFHRDMEALNVLPADVLTRVSEYVPEIVEFVRKIVSNGYGYESNG
SVYFDTQRFDSSPQHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKKSQNDFALWKAS
KLGEPSWDSPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAFFQ
NDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALAKNTARQLRLAFLMHSWKDTLDYSA
NTMESAVQYEKFMNEFFLNVKDILRAPSDLTGRFEKWEAEEAELNSSFYDRKWAVHLALC
DNMDTRSAMEEMRLLVGLSNSYIASRKSAKLRPNRLLLESVASYLTAMMKIFGAIEGSDP
IGFPVGGQAVDVSKRPICWENPPGKNRCGDPVLVRSLQLESTVMPYLAVLSDFREDVRKI
AREQKVTALLRLCDAVRDDTLPELGVRLEDHEGQPTVVKLVDKETLLREREEKKKMEEEK
KRKKEEAARKKQEQEMAKLAKMKVPPCEMFRSETDKYSRFDETGFPTHDAEGKELSKGQA
KKLRKLFEAQEKLHSEYLQMNQNGN
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagctcaccggatacagaggatgaggacagttgcagctgctcggctgctaacgtc
tgccctcttgtttctgcagcctttgagtttggctccttgctgcagattaacgaggaggcc
gcgctgacggcggccctcaacgactacctgacctcacgcagctacctggcgggcttcggc
ccctcccaggccgacctgagagcctttaggctcctcccccaaccccccgccccgcagcac
gtccacgctctgcgctggtacagacacatttccgccctgcagcaggacctgagcgcagac
ggcagcatgaaggggaagcgggtccagcctccatggtcgcctccggcgggaacagaagtt
cctcagctgcggctctacaacagcctgaccagaaccaaggagccgtttgttccccagaag
ggcaacaaggtgacgtggtacagctgcggccccaccgtttacgacgcctcacacatggga
catgccaggtcctacatctccttcgacatcctgcggcggatcctgagggattacttcaag
tacgacgtcctctactgcatgaacatcacagacatcgacgacaagatcatcaaacgggcc
cggcagaacttcctcctggagcggtacagagagaagcggccgcaggcggctcagatcctg
caggatgtcctgaacgcacgagtgccgttccgggagcagctggcctccaccacggacccg
gataagaagcagatgttggagcgtctggacgacgccgtcgccggcgccctgcagcccctg
caggtggcgatggagagcaacgcagcggctgacgtgctgcagcctctgactgaggttttg
ctggagaactcgaaggacttgctgtccgactggctggacaggcagtttggaagcgaagtc
acagaaaactccatcttctccgtcctgccgaagttctgggagggggagttccacagagac
atggaggccctgaacgttctgcctgccgacgttctgacccgagtcagtgagtacgtgccg
gagatcgtggagtttgtgaggaaaatcgtctccaacggttacgggtacgagtccaacggg
tctgtctacttcgacacccagaggtttgattccagtccgcaacattcgtacgccaagctg
gtcccagaggcggtgggagaccagaaggcgctgcaggagggagaaggcgatctgagcatc
tcagcagacagactgagtgagaagaaatcccagaacgacttcgctctgtggaaagcctca
aagctcggcgagccgtcctgggactctccgtgggggaagggtcggcccggatggcacatc
gagtgttcggccatggccggctccatcctgggagagtccatggacatccacggaggaggc
ttcgacctgcgcttcccccatcatgacaacgagctggcccagtccgaggcgttcttccag
aacgactgttgggtccgttacttcctgcacaccggccacctgaccatcgccggctgcaag
atgtccaagtctctgaaaaacttcatcaccataaaggacgccctggcgaagaacacagcg
cgccagctgcgcctggccttcctcatgcattcctggaaagacacgctggattactcggcc
aacaccatggagtcggccgtccagtacgagaagttcatgaacgagttcttcctgaacgtc
aaagacatcctgcgggcgccgagcgatctcaccggacgcttcgagaagtgggaggcggag
gaggcggagcttaacagcagtttctacgacaggaagtgggccgttcacctggcgctgtgt
gacaacatggacacccgcagcgccatggaggagatgaggcttctggtcggccttagcaac
agctacatcgccagcaggaagagcgccaagctgaggcccaaccgcctgctgctggagagc
gtcgcctcctacctcaccgccatgatgaagatattcggagccattgaaggatccgatccc
atcggttttccagtcggaggacaagctgtggatgtgagtaaacggccgatctgttgggag
aacccacctgggaaaaaccgatgcggtgacccggttctggtccgatctttgcagctggag
agcacggtgatgccctacctggcggttctgtccgacttcagagaggacgtccggaaaatc
gcccgggagcagaaagtgacggcgctgctgcggctctgcgacgccgtccgggacgacacg
ctgccggagctgggcgtccggctggaggaccacgaaggtcagcccaccgtggtgaagctg
gtggacaaggagactttactgagggagagagaggagaagaagaagatggaggaggagaag
aagcggaagaaggaggaagctgccaggaagaagcaggagcaggagatggcgaaactcgcc
aagatgaaagtccctccgtgtgagatgttccgctcagaaacagacaaatattccaggttt
gacgagacgggttttcccactcatgacgctgaaggaaaggagctgagcaaaggccaagcc
aagaagctgcggaagctgtttgaggctcaggaaaagctccacagcgagtatctgcagatg
aaccagaacgggaactag
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