Xiphophorus hellerii (green swordtail): 116718801
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Entry
116718801 CDS
T07363
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116718801
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116718801
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
116718801
NCBI-ProteinID:
XP_032416916
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Position
4:complement(18937018..18946569)
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AA seq
638 aa
AA seq
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MPSAAVGNNAVQCAIPDLGNGSHSDTMKQFLGVIDKKVRNMEKKKSKLDDYQARKNKGER
LNQDQLEALSKYQEIINNLEFARELQKSFLALGQEVQKAVKKSARREQLQREEMEQQRLK
TVLELQYLLDQLGEDGVRQDLKRPDSSGSPLLTDADLASFDEFYKLVGPDRNCDIRLTDQ
YEEASQHLWSLLEGRDKSVAGTTYKSLRETLDKLLVSGYFDRAESKQNGACETEEKPEEQ
AVVDETTVTGEQLPEPEGPNNENYTEPVQVETTEVFFNRQFVPETTYSNTDKDQVEEWSV
EAQMNSLQHHPPAQLASEPTMAVNQAAPSPTTDPVVRKQAVQDLMAQMQGTYNFMQDSML
EFDGQALDPAIVSAQPMKALQTVDLQQMGGPSIHSEPRLPQTSTVSGPQESSQTSMSLSS
EQSSAPCSLSTAFPPVSKHIHSGGINVNAAPFQSVQAVFNMNAPVPPPTDGQADALKQSS
QFPGGYGQGFTSQSENTVEQPEMPQERLQSVVGGVQPQDQVMPSTVSHDDPSAGSGFGPS
SQSFYSSRGAPRGGPRNTRGIMNGYRGSSNGFRGGYEGYRAPFSNAPSSSGYGQTQFNTS
RDYSNSSYQREGYQQGYKRGTAQGSRGLSRANAQAMRS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcagcggttggcaacaatgctgtccagtgtgccattccagacttgggaaat
ggaagtcattctgacaccatgaagcagtttcttggtgttatcgacaaaaaggtccggaat
atggaaaagaaaaagtccaaactggatgactatcaggccagaaagaataagggagaaaga
ctgaatcaggatcagctggaagccttgtcgaagtatcaagagatcatcaataaccttgaa
tttgctcgagaactgcagaagagcttcctggctttgggccaagaggtccaaaaggcagtg
aaaaaatctgcacggcgagagcagcttcagcgggaggaaatggaacagcagcggttgaag
acggttttggagcttcagtatttgttggaccagctaggggaggacggcgtgcgacaggac
cttaaaagaccagattcctctggttcccctctactcacagatgctgaccttgcatctttt
gatgagttttataaactggtgggtcctgacaggaactgtgatatcagattgactgaccag
tatgaagaggcctcacagcacttgtggtctctccttgagggtcgagacaagtctgtggcg
ggaaccacatacaagtcactgagggagactctggacaaactactggttagtggttacttt
gacagagcagaatctaaacagaacggagcttgtgagacagaagagaaaccagaagagcag
gctgttgtggatgaaacaacggttaccggggagcagctacctgaacctgaaggaccaaat
aatgaaaactacacagagcctgtccaagtggaaaccacagaggttttttttaacagacag
tttgttccagaaactacatacagtaacactgacaaagaccaagtggaggagtggagtgtg
gaggctcagatgaattccctccagcaccacccgcctgcacagctggcttctgagcccacc
atggctgtgaaccaagctgctccctctcctaccactgaccctgtggtcagaaagcaggcg
gtgcaagatctcatggcccaaatgcaaggaacttacaacttcatgcaggactccatgtta
gagtttgacggccaggctctggacccagccatcgtgtctgcccagccaatgaaagctctg
cagacggttgacctgcagcagatgggtggcccttcaatccactcagaacccagacttcct
cagacaagtactgtatctggaccacaggaatcctcccaaacctctatgtctctgtcatct
gaacagtcttctgccccatgttccctgtctaccgccttcccacctgtctccaaacatatc
cactccggaggcatcaatgtgaacgcagcacctttccagtcagtgcaagcggtatttaat
atgaatgcacctgtacctccacccactgacggccaagcagatgcactgaagcaatccagc
caatttcctggtggctatggccagggctttaccagccagtcagagaacactgtagagcag
ccggaaatgccacaggaaagattacagtcagttgttggtggagtccagcctcaagatcag
gtcatgccatcaacagtaagtcatgatgatccctctgcagggtcagggttcgggccgtcc
agccagtctttttacagcagcagaggtgcacccaggggtggacccagaaacacccgtggc
attatgaatggataccggggctcctcaaatggatttagaggtggttatgaaggataccgt
gctccattttcaaacgctccttccagcagtggttatggccaaacccaatttaacacatct
cgggactattccaacagcagctaccagcgtgagggatatcagcaaggctacaagcgggga
actgcccaaggatcaagaggcctgtcccgggccaacgctcaagcaatgcgatcctaa
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