Xiphophorus hellerii (green swordtail): 116718859
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Entry
116718859 CDS
T07363
Symbol
irx3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116718859 (irx3)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116718859 (irx3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
116718859
NCBI-ProteinID:
XP_032417003
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Position
4:7791362..7794778
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AA seq
428 aa
AA seq
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MSFPQLGYQYIRPIYPPERQGIAGSARAGTELSPSGALSNVLSSMYGSPFAAAAQGYGAF
LPYSNDISIFNQLGAQYDLKDGHGVQHPGFAPPHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTD
EEGNVYTSDHEGEEGDKREDEEEIDLENIDTENIESKDDLDDQDDLHSDIKLDGRSDSEI
SDGYEDLQGPDQRFLKAVGKEAKEAQRGGELFHGHHHHHPSLDIKASQPNAEQLKLNQVS
VSSPPSENNPAPAQKPKIWSLAETATAPDNPRKSPQVNGSGSAATGGGTATQTILGPHRL
ISSCPVGKIQNWTNRAFSAHQLALLNSNHYLGLANQATATSLALYSSRQTEDKSHSSETS
VTGTCPRH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggatatcagtacatccgaccgatatacccgccggagcgccaa
gggatcgccggcagcgcccgggccgggacggagctgagtccgtccggcgcactttccaac
gtcctctccagcatgtacggatctcctttcgccgcagccgcgcagggctacggagccttt
ctaccttactccaacgatatatcaattttcaatcaattgggcgcccagtatgatctgaaa
gacggccacggtgtccagcacccagggttcgctccccctcaccctgctttttacccatat
ggccagtatcagttcggtgacccgtccagacccaaaaacgccaccagggagagcaccagc
actctgaaggcctggctcagcgagcaccgcaagaacccttacccaaccaagggcgagaag
atcatgctggccattatcaccaagatgaccctcacccaggtgtccacctggttcgccaac
gccaggaggcggctaaagaaggagaacaagatgacctggaccccccggaaccgcaccgat
gaagaagggaatgtttacaccagcgaccatgagggggaggagggggacaagagggaggat
gaggaggagattgacctggagaacatcgacacggaaaatattgagagcaaggacgacttg
gacgaccaggacgaccttcactcggacataaaactagacggaaggagtgactctgagatt
tcggacggttatgaggatttacaagggccggatcaaaggtttctgaaggctgtggggaag
gaggccaaggaggcgcagagaggtggagagctcttccacggccaccatcaccaccaccca
tctttggacatcaaggcgtcccaaccaaacgcagaacagctcaaactcaaccaggtgtcc
gtcagctctccaccttcagagaacaacccagccccggcccagaaaccaaagatctggtcc
ctggcagagacggctacggcccccgacaatccgcgcaagtcgccgcaggtgaacggcagc
ggctcagcagcgacgggaggagggacggccacccagaccatcctcggcccgcacagacta
atctcttcctgtcccgttgggaaaatccagaactggacgaaccgagcgttctcggcgcac
cagctggctttactgaactccaatcattatctgggactggcgaaccaggccaccgccacc
agcctggcactgtacagcagcaggcaaacggaggacaagagtcatagttcagagacttca
gtcacaggtacatgtccccggcactga
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