Xiphophorus hellerii (green swordtail): 116718861
Help
Entry
116718861 CDS
T07363
Symbol
cdh15
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116718861 (cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116718861 (cdh15)
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Major cadherins
116718861 (cdh15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Big_13
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116718861
NCBI-ProteinID:
XP_032417005
LinkDB
All DBs
Position
4:complement(20303589..20321000)
Genome browser
AA seq
802 aa
AA seq
DB search
MALWRLMSCLLSLLVCQVCSSAEYHHNEAEQDLHALYLWRNKGKGMIRVKRDWIIPPIRV
SENSRVVPEDLIQIKSDKIFSGEVIYKLEGPGVDQEPKNLFEIDDKTGMIRSKRPLDREQ
HSSFTLKAFALSPSGERLENPTTIEIVVLDQNDNKPVFTQKQFFGSVQEFSVPGTLVMSV
SATDADDPMTENAALGFSIVGQESIPPNAVNKTMFGINNQTGAIYIRDVGLDREVVKEFK
LKLRVADMGGDGLISDAVAIITVSDINNHAPQFHPTSYNIKALENVYNVEIGRVSVIDRD
DPGTGNWEVKYTVSHDPFGNFAVQTDPVTNQGILTVVKPLDYEVKREHNLILTVENINPL
SIKAPNLPLSSATVSITVVNENEAPYFKENPILIQVPENEKPGKLLKSNIASDPDHSELR
FEISKDPEGWLDINRETGNIFLRRSFNIRSPHVENNIYSAVIKVTDAGGVSASAAVSIIL
EETNDFPPQLLPLSRFLCTGDSRRTPGFLLTAVDEDRSPHASPFIFVIPDSLLLNWTVTQ
VNDTHAILRPTEELEAGEYTVTVWVTDSGSPSQSALSQVNVTACLCDSYGDCRFEAGAFL
GSRVGISFIALIIIIASGVLLLVLLFLAVAINACGRRHHIKKGSGLLVGESEDDIRDNIL
NYDEQGGGEEDENAFNIDLLWNPRDAPPTPWSFYPGSGLPRGKQPLRKDAPHNLPSPIYP
RRPPADPTDIEDYINEGLEAADNDPNVPPYDTALIYDFEGEGSVAGSLSSIASGSSDGDQ
DYDYLNDWGPRFQKLANMYDPR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtggaggttgatgagctgcttgctgagtctgctggtctgtcaggtctgtagc
tctgctgagtatcaccacaatgaggcagagcaggaccttcacgctctttacctctggaga
aataaaggaaaggggatgataagagtcaagagagactggatcatcccccccatcagagtt
tcagagaacagcagagttgttcctgaagacctgatccagatcaaatcagacaaaatcttc
tcgggagaggtgatctacaagctagagggaccaggggtggaccaggagcccaaaaacctg
tttgagattgatgataaaacaggaatgatcaggagcaagaggccgctggacagagagcag
cacagcagcttcacgctgaaggcatttgccctgtcccccagcggagaaagactggagaac
cccacaaccattgagatagtggtgctagatcagaacgacaacaagcccgttttcacccaa
aagcagttttttggatcagtccaggagttctctgtcccaggaacattggtgatgtcagtc
tcagcgacagatgcagatgacccaatgacagaaaacgcagctctgggcttctccatcgtt
ggtcaggaaagcattcctcccaatgctgtaaacaagaccatgtttggtattaacaaccaa
acaggagctatttacatcagagatgtgggcctagaccgagaggtggtgaaggagttcaag
ttaaagctgcgggttgctgatatggggggcgacggattaatcagtgatgctgtagccatc
atcactgtatcggatatcaacaaccatgcaccacagttccaccctacctcatacaacatt
aaggcactggagaacgtttacaacgttgagattggccgagtgagcgtgatagacagagac
gaccctggaacaggaaactgggaggtcaaatacacagtatctcatgacccatttggaaac
tttgccgtccagacagatccagtcaccaaccagggaatcctgactgtggtgaagccccta
gattatgaagtcaaaagggagcacaacttgattctgactgtggaaaatatcaatcctctg
agcatcaaggcgcccaacttacctctgagttctgccactgtgtcaatcacagttgtcaac
gagaatgaggctccgtattttaaggagaaccccatactgatccaggtccccgagaacgag
aaacccggaaagctgctgaaaagcaacattgcctcagacccggaccattctgaactgagg
tttgaaataagcaaagaccctgaggggtggctggacatcaaccgagaaacaggaaacatt
ttcctcagaagatccttcaacatcagatccccacatgtcgaaaacaacatttacagtgca
gtcatcaaggttacagatgccggtggtgtttcagcctctgcagcggtgagcataatcctg
gaggaaaccaatgacttccctccccagctcctccctttgagccgtttcttatgcacgggt
gacagcagaaggactcctggttttttactaactgctgtggatgaagatcgttctccacat
gcctctcccttcatttttgtcattcctgactctttgttgttaaactggactgtcactcaa
gtcaacgatactcatgcaatcctccggcccactgaagagctggaagctggagagtataca
gtcactgtgtgggtcacagactctggcagcccatctcagagtgctttaagtcaagtcaat
gtcaccgcatgtctctgtgactcctatggtgactgtagatttgaggcaggggctttctta
ggctccagagtgggaatcagcttcatcgctctcattattatcattgcatctggtgttctt
ctacttgtgctgctattcctggctgtggctataaatgcctgtgggagacgtcatcacata
aagaaaggatcaggtctgcttgtaggggaatcggaggacgacatacgcgacaacatcctc
aactacgatgagcagggaggcggtgaggaggatgaaaacgccttcaacattgacctcctg
tggaacccccgtgatgcgcctcccacaccgtggtccttctacccggggtctggccttcct
cgaggcaagcagcccctcaggaaggacgccccacacaacctgccctcccccatttacccc
cggcggcctcccgcagatcccactgacatcgaggactacatcaatgaaggcttggaggct
gctgacaacgatcccaatgtgcctccatacgacacagccctgatctacgacttcgaggga
gaaggctcagtggctggcagcctcagctccatcgcttcgggcagctcagacggagatcag
gactacgattacctcaacgactggggaccacgctttcagaaactagccaatatgtacgac
ccacgttaa
DBGET
integrated database retrieval system