Xiphophorus hellerii (green swordtail): 116718911
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Entry
116718911 CDS
T07363
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116718911 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116718911 (nudt21)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
116718911 (nudt21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
116718911
NCBI-ProteinID:
XP_032417095
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All DBs
Position
4:complement(15807094..15812437)
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AA seq
229 aa
AA seq
DB search
MSVVQPSRSSTGWPRRGGEQFGGKYISGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEV
EGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgtgcagcccagtcgctcgtccaccgggtggccgcgccgcggcggagagcag
ttcgggggcaaatacatcagcgggcccgctaaaccgctcaccctggagcggaccatcaac
ctatatcctctcacgaactacacgtttggcaccaaggagcctctttacgagaaagacagc
tctgtggccgccaggttccagagaatgcgtgaagagtttgataagatgggcatgcgccgg
acagtagagggagtcctcatcgttcacgagcacaggctgcctcacgttctcctgctgcag
ctgggcacaacatttttcaagctgcctggtggagagctgaatcctggagaagacgaggtg
gagggtctgaaacgcctgatgactgagatcctcgggcggcaagacggggtgaagcaggac
tgggtgatagatgactgcatcggtaactggtggcgccccaactttgagcctccgcagtac
ccgtacattccagctcacatcactaaacctaaggagcataaaaagctcttcttggttcag
ctgcaggagaaagcattatttgccgttcccaaaaattataagctggtggctgctccgttg
tttgaactgtacgacaacgctcctggatatgggccaatcatttccagtctaccgcagcta
ctgagcaggttcaactttatctacaactaa
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