KEGG   Xiphophorus hellerii (green swordtail): 116719070
Entry
116719070         CDS       T07363                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xhe03036]
    116719070 (wdhd1)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    116719070 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Beta-prop_THOC3 Ctf4_C Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 HMG_WDHD1 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_WDR3_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st WDR55 WDR90_beta-prop_4th HMG_box WD40_Gbeta Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR75_1st NBCH_WD40
Other DBs
NCBI-GeneID: 116719070
NCBI-ProteinID: XP_032417327
LinkDB
Position
4:3207688..3236468
AA seq 1105 aa
MPCERKPMRYGHSEGHTEVCFDDTGRYIVTCGNDGDVRIWESLDDDDPKFITVGEKAYSL
ALKKGKLVTASSSNTVQIHTFPDGDPDGILTRFTTNATHVTFNRSGTRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVTFDPKDEYLASSSCDGSVVVWSIEQQTQVISWPLLQKT
NDVSNATSLCRLAFQPAAGKFLAVPVETRVHLYERGTWDHVGSLSDELLTQPVNVAAWSP
CGRFLAAGAIGGLLTIWDVNSRLVVERQKHEKGFTVCSLAWHPSGSQIVYTDTEGCLGLL
DGLGTSGTGTSSTKASAAKPKDYDDLFDEDDDRLMDEGLSDANSPVKKAAEDEDDDDFLI
PSTGRVRNRGAILNDENSLDTGSLKLGQDKFGDDEDDDAGSSVAPAAAQRPVYDGPVPTP
PQKAFQPGATPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAVHHAMHLTNSLGHT
MADLSQEAVLLACPSTDDLASKLQCLHFSCWDTSKEWMVDLPPGEDVKALCLGQGWAAVA
TSALLLRLFSVGGVQREIFSLPGPVVCMAGHGEQLLVVYHRATGFDGEQALGIQLLQFGL
RKRQLMNGEPLPLSPKSYLSWAGFTAEGTACYVDSNGLVRMLNRALGNTWTPVCNTRETC
KSKSDHYWVVGAHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTSTEKGQMEEQ
YWRSVLFHNHYSFLSSSGYEVDEAAQTQSDKEQQELLMKMFALSCKLEREFRCVELAELM
TQNVVTLAIRYASRSRRMNLAQRLSEIALEKSTQLQEDEEPEDEPEFTSDRRTSGYRQSE
PYNTRQNEEEEDDEEEERVEEEDRREMETEETKRRLNPFAKESGLPAKPSLTPVGRVGRS
NPFKVADSGKPTSSSGQPRASNILDNMRSSRKLAPLSGSAGKPSKGPVLKPLAPRTKAKA
QSTLLQISSNKMPSKKTPEAAEPAADLQKQPDVVAPPAENTENKRPKTGFQLWLDENRKI
IIADNPDLDETDVIKEAMGRFRTMSADERLSWTERAKGQSGDAADVKKRKRSENEAVESD
ESNAKKKSSSLDPSSKLSAFAFSKN
NT seq 3318 nt   +upstreamnt  +downstreamnt
atgccctgcgaaaggaagccgatgcgctacggccactcggagggacacaccgaggtctgc
ttcgatgacaccgggaggtatatcgtaacctgtggaaacgacggcgatgttcggatttgg
gaaagcctggatgacgacgatccaaagttcatcaccgttggggaaaaggcttactccctc
gcactcaagaaaggcaagttggtgacggcgagctccagcaacacggtgcagatccacacg
tttcctgacggcgatccagatggcatcctgacgcggttcaccaccaacgccactcacgtc
accttcaaccgcagcggcaccagagtcgccgccgggtccagtgacttcatggtgaaggtg
gtggaggtgtcagacagcagccagcagaaaacactgcggggtcacgaagcgcccgtcctc
agtgtgacctttgaccctaaagatgaatacttggcgtcttccagctgcgacggctcggtc
gtcgtgtggagcatcgagcagcagactcaggtgatcagctggccgttgctgcagaaaacg
aacgacgtcagcaacgccacgtctctgtgccgtttggcgttccagcctgcagccgggaag
tttttagctgttccagtagaaaccagagttcacctgtacgagcggggaacctgggatcac
gtcggctcgctgtccgacgagctgctcactcagcctgtgaacgtggcggcctggtcccct
tgcggccgcttccttgcagccggcgccatcggaggtttgctgacgatctgggacgtgaac
agccgactggtagtggaacggcagaagcatgagaaaggattcacggtgtgtagcttggcc
tggcatccatccggcagccagatcgtctacacggacacagagggctgcctgggcctgctg
gacggactcggcacctccggtaccggtaccagctccaccaaggcttcagctgcgaaacct
aaagactacgacgacctgtttgacgaggatgatgacaggctgatggatgaaggactaagc
gacgccaattcaccagtaaagaaggcggcggaggatgaggacgatgacgacttcctgatc
ccgtccacgggtcgagtgaggaacagaggcgccatcctgaacgatgagaactcgctggac
acaggatccctaaaactcggtcaagataagtttggtgatgatgaggatgatgacgccggc
agctctgtagccccggcggcggcgcagcgccccgtctacgacggcccggtgccgactcct
ccccagaaggcctttcagcccggagccacgccagctcacctcactcaccgcttcatgatg
tggaactctgtggggatagtgcgaggctacaacgacgagcaggacaacgccatcgacgtg
gagtttcatgacaccgccgtccaccacgccatgcacctcaccaactccctgggtcacacc
atggccgacctttcccaggaggccgtgctgctggcctgtccaagcaccgacgacctcgcc
agtaagctgcagtgcctccacttctcctgctgggacaccagtaaggagtggatggtggac
ctgccgccgggcgaggacgtgaaggcgctgtgtctgggtcagggctgggcggccgtcgcc
accagcgcgctgctgctgcggctgttctccgtcggcggcgtccagagggagatcttcagc
ctgccggggccggtggtgtgcatggccggccacggggagcagctgctggtggtttaccac
agagcgacgggtttcgacggagaacaagctctcggcattcagctgctgcagtttggtctc
agaaagaggcagctgatgaacggcgaaccgctccccctctcccccaagtcgtacctctcc
tgggctgggttcaccgccgaaggcacggcgtgctacgtggattcaaacgggctggtgcgg
atgctgaaccgcgccctgggcaacacgtggacgccagtttgtaacaccagagaaacctgc
aagagcaaatcggatcactactgggtggttggggcgcacgagaacccccagcagctcagg
tgtatcccatgcaaaggctcccggtatcctcccactctgcctcggccggctgtcgccatc
ctgccgtttaagctgccgctgtgtcagaccagcacagaaaagggacaaatggaggagcag
tactggcgttccgtcctcttccataatcactacagcttcctgtcctccagcggctacgaa
gtcgacgaggctgcgcagacgcagtcggacaaggagcagcaggagcttctcatgaagatg
tttgctttgtcctgtaaactggagcgggagtttcgctgcgtggagctggcggagctgatg
acccagaacgtggtgactctggcgatccggtacgcgtcccgatccaggcggatgaacctg
gcgcagcggctcagcgagatcgcgctagagaagtcgacccagcttcaggaagacgaggaa
cccgaagatgagccggagttcaccagcgacagacgcacctcgggttatcggcagagcgaa
ccttacaacacgaggcagaatgaggaggaggaggatgatgaagaagaagagcgagtggag
gaagaggacagaagggaaatggagaccgaggaaactaaaagacgtttgaatcctttcgct
aaagagtcgggtttacctgcgaagccgtcgctgacgccagttggtcgagttggaagatca
aaccccttcaaggtcgctgattctggcaagccgacgtcttcgtccggacaacctcgagcg
tcaaacatcctggacaacatgaggtccagcaggaagctggcgccgctcagcgggtcggca
ggaaaacccagcaaagggcccgtcctcaagccgctggctcccagaaccaaagccaaggct
cagtcaactctgctgcagatctccagcaacaagatgcccagtaagaaaactccggaggcc
gcggagccggccgcagatctgcagaaacagcctgacgttgtagcgccacctgcagaaaac
acagaaaataagaggccaaaaacgggcttccagctgtggctggatgagaaccggaaaatc
ataatcgccgataatccggacctggatgagacggacgtcatcaaagaggcgatgggacga
ttcaggacgatgtcagcagacgagagactgtcgtggacagaaagagcgaaaggacaaagc
ggagacgctgcagacgtgaagaaaagaaagagatcagaaaacgaagcggtggagagcgat
gaaagtaacgccaaaaagaagtcgtcgtcgctggatccgtcctccaagctgtctgcgttc
gcattcagcaaaaactga

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