Xiphophorus hellerii (green swordtail): 116719088
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Entry
116719088 CDS
T07363
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
xhe03083
Polycomb repressive complex
xhe04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116719088
03083 Polycomb repressive complex
116719088
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
116719088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116719088
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116719088
Histone modification proteins
HAT complexes
HATB complex
116719088
HDAC complexes
Sin3A-HDAC complex
116719088
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116719088
PRC2.2
116719088
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116719088
Heterochromatin formation proteins
Other heterochromatin formation proteins
116719088
Chromatin remodeling factors
NuRD complex
116719088
NuRF complex
116719088
NuRF complex (fruit fly)
116719088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
116719088
NCBI-ProteinID:
XP_032417363
LinkDB
All DBs
Position
4:34116645..34126836
Genome browser
AA seq
426 aa
AA seq
DB search
MAEKEVYDDAVEERVINEEYKIWKRNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGTGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSSEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaggaggtgtacgatgatgcagtggaagaaagggtcatcaatgaagaatac
aagatctggaagaggaacactccatttctgtacgacctggtcatgacccatgccctggag
tggcccagtctgactgtgcagtggcttccagatgtcaacaggccagaggggaaggactac
acagtccaccggctggttctggggacccacacatcagatgagcaaaaccatcttgtaata
gccagtgtccaggtaccaaacgacgacgcccaatttgatgcatcacactacgatagtgaa
aaaggagcagagtttggtgggtttggctcagtgagtgggaaaatagagattgagatcaag
attaaccatgaaggagaggtgaaccgagcacgctacatgccccagaatccctgcattatt
gccaccaaaactcccacatctgacgttctggtctttgactacaccaagcacccatcaaag
ccagatcccagtggggagtgcagtcctgacctgaggctcaaaggtcaccagaaagaaggt
tacggcctttcctggaatccaaacctcagtggcaacctgctcagtgcctctgatgaccat
accatctgtctgtgggacatcggcaccggcccaaaggaaggaaaaattgtcgacgctaag
accatcttcactggtcacaccgcagttgtggaagacgtgtcgtggcatttactccatgaa
tccttgtttggctctgttgctgatgatcagaaactaatgatatgggacactcgttccaac
aacacttctaaagccagccactcggttgatgctcacactgctgaggtcaactgtctgagc
ttcaatccctacagcgagttcattcttgctacaggttctgcagataagactgttgcattg
tgggatctaaggaatctcaaactgaagctccactcttttgagtcccacaaggatgaaatt
ttccaagtccagtggtcgcctcacaatgaaaccatcctggcctccagcggtaccgaccga
cgtctcaacgtctgggatctcagcaaaattggggaggagcagtcttcagaggacgctgag
gacggcccaccagagcttctgttcattcatggtggccacacggccaagatatcagacttc
tcctggaaccccaatgaaccctgggtcatctgctccgtgtccgaagacaacatcatgcaa
gtctggcagatggcagagaatatctacaatgatgaggagccagacaacacacccgcatca
gagctggaagctcaaggataa
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