Xiphophorus hellerii (green swordtail): 116719154
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Entry
116719154 CDS
T07363
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116719154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116719154
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
116719154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
116719154
NCBI-ProteinID:
XP_032417450
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All DBs
Position
4:complement(23599567..23623460)
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AA seq
695 aa
AA seq
DB search
MGRTPQRDPKEEKKERRSSITAGSALDKSNEPFSWEDYLRETSSVAASPSCFKQSRIPPS
NDFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSSDIQPIGT
CERTGDMLQPPLGFRMNASSWPMFLLRTLSGAEIAPASAFKKEPASADKNYFHPGMKLEA
VDRKNPYLICPATVGEVRGLEIFVMFDGWRGAFDYWCPFDSRDIFPVGWCALTKHSLQPP
GNFFTLPGALLAPVSSTSATRRSSFNSSSSSTSMQTSYRLPNPLPPLPVRKGVRGRRPKS
QTIALLKAAAEAAAAAAAAVNGAPQSPVTETSLAPRPHKKRGPKPKGKKKPLMGQSPGSS
PVTTPPPEIKLNPSHVSVDSNLSNGSNVICTVCVYVNKHGNYGPHLDRKLVQQLPDHFGP
APVNAVLQQAVQACVDCTYQPSVLLSFLQSQSHSGGEVIRVCSEHGIRYVKLPSASSASS
VLRFLENMCQHLESDSLFSSQPFNPYSNSTRFYNRTKSVHGVCAASCLGTEPLSITENGV
SNDNPTKDPTPAPRPLHNTLDYRAAKRERPCYPGHTQTPPPLRRVSSNPPELGPVNTHRR
VEAASSTTGPDHMKQDRETSGNNASSWSVDEVIRFVQEADPQTLGPHVDLFRKHEIDGKA
LMLLRSDVIMKYMGLKLGPALKLCHHIEKLRQTKH
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgggacggacaccacaaagagatccaaaagaggagaagaaggagaggcggagcagcatc
acagcaggctctgccctcgacaaatcaaacgaaccgtttagctgggaagactatctgaga
gaaacctcatctgttgcagcatcaccttcttgcttcaaacagtctagaatccccccttcc
aatgatttcaaagctggtatgaagcttgaggctcgagaccctcgcaactctaactcggtg
tgcatcgccacggtgatgggcatgatggggactcgcctgcgactacggctggatggcagc
gacaacactaatgacttctggcggcttgtggactcttcggacatccagccaataggaact
tgtgaaaggactggagacatgctgcagccgcccctcggtttcaggatgaatgcatcctca
tggcccatgtttctcctgcggacgctaagcggtgcagagatagcccccgcctctgctttt
aagaaggagccagccagcgcagataaaaactacttccaccccggcatgaagctggaggct
gtggacaggaaaaacccctacctgatctgtcccgccacggtgggagaggtccgaggcctt
gagatttttgtaatgtttgatggctggcgaggtgccttcgactactggtgccccttcgac
tccagagacatcttccctgttggttggtgtgccctgacgaagcacagcttacagccacca
ggaaacttctttactcttcctggtgcacttctcgctccggtttcttccacatctgcaaca
cgtcgctcctctttcaactcctcctcatcctcgacctccatgcagacctcataccgactg
ccaaatcccctgccacccctccccgtccgcaagggtgtccgaggtcgccgtccaaaatcc
cagaccattgctttgctgaaagcagcggctgaggcggcggcggcggcggcagcggccgtg
aatggagcaccgcagagcccagtgactgagacttcactggcccccagaccacacaagaag
agaggaccgaagcctaaaggcaagaagaaacctctgatggggcaatccccaggctcatct
ccagttactaccccgcctccagagatcaaactgaaccccagccacgtctctgtggacagc
aacctcagcaacggctcaaatgtaatttgcacagtgtgtgtctatgtcaacaaacatggc
aactatggcccacatctagatcgaaaactggtccagcagctgccggaccactttggtcca
gctccggtcaacgcagtccttcagcaggctgttcaggcctgtgtggactgtacgtatcag
ccctcggtgctgttgtcctttctacagagccagtcccactcgggaggagaggtcattaga
gtttgctcagagcatggcattcgctatgtgaagttgccctcggcctccagtgcgtcgtct
gtgttgcggttcttggaaaacatgtgccaacacctggagagcgacagtcttttcagctcg
cagccctttaacccctacagcaacagcacacgcttctacaacagaaccaagtcagttcat
ggagtatgtgccgcgtcgtgtcttggaacagaaccactgtccatcactgagaacggcgtt
tccaatgacaatccaacaaaggaccccacacctgcccctcggccccttcacaacacactg
gactacagagcagcaaagagggagcggccgtgttatcctggacacacacaaacaccaccg
ccccttcggcgagtcagctccaacccccccgagcttggtcctgtaaatacacacagacga
gtggaagcagctagctcaacaacaggtccagatcacatgaaacaggacagagagacttca
gggaacaacgcttcctcctggtcagttgatgaggtcataagatttgtccaagaggcggat
ccacaaactcttggtccgcatgtcgacctgttcaggaaacatgagatcgacggcaaggct
ctgatgctgctgcgcagtgatgtcattatgaagtacatgggactgaagctgggtccggct
cttaaactgtgtcatcacatcgagaagctgagacagaccaaacattga
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