Xiphophorus hellerii (green swordtail): 116719204
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Entry
116719204 CDS
T07363
Name
(RefSeq) EMILIN-1-like isoform X1
KO
K24246
emilin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116719204
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
C1q domain-containing proteins
Emilin / mutimerin group proteins
116719204
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GFIT
Motif
Pfam:
EMI
C1q
Baculo_PEP_C
SlyX
IFT57
Fib_alpha
ATG17_like
FapA
DUF4407
Sec10_N
DUF1664
Bacillus_HBL
Motif
Other DBs
NCBI-GeneID:
116719204
NCBI-ProteinID:
XP_032417553
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Position
4:694849..711565
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AA seq
1122 aa
AA seq
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MGALPLLLLVLWICEHASSTFPMRASYSLYADAHAHGARAASRHRNWCAFVLTKTVSCVV
EDGVETYVKPDYHPCSWGSAQCSRVVVYRTYMRPRYKVAYKTVTEMEWKCCHGYSGEDCS
VGPTGRAGSHTSNGAWTGSGSGTRQNGGLQDREEIRKLEEKIQRLTEKLQDFQSTMNEHL
HHEPVRPGKNPADAAPPEIKETIHSIQTKLDQLDNRTKAHDKTLVTINNHLVNGKGNDLD
GDVSPGGLSREQLSSLKESILKELERRVLLSCSSCQAGVEDLRRQQQQDQERIRALEKQL
NDADVRHRQDAEKLRLELQHSQRCCTTINDLQNRITDAENKISSVSENFNVLLDRLRPGS
DGGESQGGGGASGGEEATAGGGATGGAIGGGGVSGGGRASGGGDGLTDVRLNLLKDLELR
INSSVLQVCSHLEADLREFVQRELDDLRTAFSHRFDDRTFRIEDVELEVEQLQSNLLEQD
RRMSALENQTAETRRRMEECHCTGGGGASGTGGGEGEERGGDTGEGINGSHGGGAGSAGS
GGGTGGGLSGGRENTTKKSLEWRVVANEGQIRHFNTRLKDLSVSGDSLHDRVLDLSHDVR
AIKSLTGDNGENFNRIVMEVEMLGQDCELCSRVEAELQNLRNRSQDLSAMQEALQNLENR
VGSIQTRLDLDGGGCSWVCSPLQDEVRSLRDEVRRCSERCSPGPGPGPDSFTAGDGSTGG
GFGPNLDAEKPLDGHSVIGGFFNSNQLKTLQDELSDIIFTFGSINDTLKGLEHSVQKHGS
VITDLGNTKDKIISELDKIQQEVTEHVQRSQERLDRTDRDIRRLESMLVAEMGDCRRSGD
GLEKRLSKLEGVCARLDDVSDSISKVKEGLNHHVSGLWSHVSNLNQTLIQHGGILDSVQK
NQERVQSRVKSLNSSLAQVQKELQTGQTGLPGPPGEKGLMGLPGSRGPPGPPGLKGDAGS
RGFPGPKGEPGLPGVDAHRPRLSFSAGLTALKETPGTVVFNKIFVNEGNFYNPVTGVFTA
PVDGHYYFSAVLTGHKNEKIEAVLAKSNYSVARVDSGGYQPEDLEAKPVAESKVSSGSLA
VFSLVLPLQRGDTVCVDLVRGRLPHSVEPLTVFNGMLLYENL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgctcccgttgcttttgctcgtgctctggatttgcgagcacgccagcagcacg
ttcccgatgcgcgcctcctacagcctgtacgccgacgcgcacgcgcacggagcccgcgca
gccagcagacacaggaactggtgcgcgttcgtcctcacgaagacggtgagttgcgtggtg
gaggacggcgtggagacctacgtgaagcccgactaccacccgtgcagctggggcagtgcc
cagtgcagccgggttgtggtctaccggacctacatgaggccccgctacaaagtggcctac
aaaaccgtgacggagatggagtggaagtgttgccatggttacagcggagaggactgcagc
gtcggtccgactggcagagcaggaagtcacacgtccaacggagcgtggacaggaagtggt
tctggaaccagacaaaatggaggactacaggaccgggaggaaatcagaaagttggaggaa
aagatccagaggctgacagagaagcttcaggatttccagtccaccatgaatgaacacctc
caccacgaacctgtcagacccggaaaaaacccggcagacgctgcgccgcctgaaatcaaa
gagacgatccacagcattcagaccaaactggaccagctggacaaccgaaccaaggctcat
gataaaactctggtgaccattaacaaccacctggtgaacgggaagggcaacgatctggat
ggagacgtttcccctggaggactgagcagagagcagctgagctccctgaaggagagcatc
ctgaaggagctggagcgcagagtgctgctgtcctgctcctcctgtcaggccggcgtggag
gacctgcggcgccagcagcaacaggaccaggagagaatccgcgctctggagaagcagctg
aatgacgccgacgttcgccaccgacaggacgccgaaaagcttcgactggagctgcagcat
tcccagagatgctgcaccaccatcaacgacctgcaaaaccgcataaccgacgccgaaaac
aagatcagctcagtctcagagaacttcaacgtcctgctggaccgcctgaggcccggcagc
gacggaggagagtcccagggagggggaggagccagtggaggagaagaagctactgcaggg
ggaggagctacaggcggggcaattggagggggaggagttagtggaggaggtagggctagt
ggaggaggcgatggtttgaccgatgttcggttgaatctcctgaaggacttggaactccgc
atcaacagcagtgttctgcaggtctgctctcacctggaggccgacctgagggagtttgtc
cagagagagctggacgacctgcggacggcgttctcacaccgcttcgacgaccgcaccttc
aggatcgaagacgtggagctggaggtggaacagctgcagagcaacctgctggagcaggac
aggagaatgtcagcgctggagaaccaaacggccgagacgaggaggaggatggaggagtgc
cactgcacaggtgggggaggggcttctggaacaggtggaggtgaaggagaagaaagaggc
ggagacactggggaaggtatcaatggatcacatggaggtggagcaggaagcgctggatca
ggtggaggaacaggtggaggtttatctggcgggagagaaaacacgaccaagaaatctctg
gagtggagagttgtggccaatgagggtcagattcgacacttcaacactcgactgaaggac
ctgtcggtgtctggagactccctgcatgaccgggttctggacttgagccatgacgttcgg
gcgatcaagtcgctgaccggtgacaacggtgagaacttcaaccgcatcgtgatggaggtg
gagatgttgggccaggactgtgagctgtgcagccgcgtggaggcggagctgcagaacctc
cggaatcggtcccaggacctgagtgccatgcaggaggcgctgcagaacctggagaatcgc
gtcggttccatccagacccggctggacttggacggcggcggctgcagctgggtctgctcg
ccgctgcaggatgaggtccgctcgctgcgagacgaggtccggagatgctcggagcgctgc
agtcccggtcccggtcccggtcccgactccttcacagcaggtgacggttccactggcgga
ggcttcgggccaaacctggacgcagagaagcctttagatggccacagcgtgattggagga
ttcttcaacagcaaccagctgaagacgctgcaggacgagctcagcgacatcatcttcacc
ttcggctccatcaacgacacgctgaagggcctggagcacagcgtgcagaaacacggcagc
gtcatcaccgacctgggaaacaccaaggacaagatcatctctgagctggacaagattcag
caggaagtgacggagcacgtccagaggagccaggagcggctggaccggacggaccgggac
atccgccgcctcgagagcatgctggtggcggagatgggcgactgccggcgttccggagac
gggctggagaagaggctgtccaagctggagggagtctgcgccaggctggacgacgtctcc
gactccatctccaaggtcaaagaaggcctgaatcaccacgtgtcgggtttgtggagccac
gtttccaacctgaatcagaccctcatccaacatggaggaatcctggactctgttcagaag
aaccaggagcgggtccagagcagggtgaagagcctgaactccagcctggcccaggtccag
aaagagctgcagactgggcagactggccttccagggcctccaggagagaaaggcctgatg
gggctgccgggctcccgggggccccccggacctcctgggctgaaaggagacgccggatcc
cgaggatttccaggtcctaaaggtgaaccaggtcttccaggtgtggacgctcacagaccc
aggctgtcgttctctgcaggcctcaccgccctgaaggaaacgccgggaaccgtcgtcttt
aacaagatcttcgtcaacgagggcaacttctacaacccggtgacaggtgttttcaccgcc
ccggtggacggacactactacttcagcgccgtcctgacgggacacaagaacgagaagatc
gaagcagttctggccaagtccaactacagcgtggcccgggtggactcgggggggtaccag
cccgaagacctggaggccaagccggtggccgagtcaaaggtcagcagcggctcgctggcc
gtgttcagcctggtgctgccgctgcagcgcggcgacacggtgtgcgtggacctggtgagg
gggaggctgccccactccgtggagccgctcaccgtcttcaacggcatgctgctgtatgaa
aacttatga
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