Xiphophorus hellerii (green swordtail): 116719230
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Entry
116719230 CDS
T07363
Symbol
pole3
Name
(RefSeq) DNA polymerase epsilon subunit 3
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03030
DNA replication
xhe03082
ATP-dependent chromatin remodeling
xhe03410
Base excision repair
xhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116719230 (pole3)
03410 Base excision repair
116719230 (pole3)
03420 Nucleotide excision repair
116719230 (pole3)
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116719230 (pole3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhe03032
]
116719230 (pole3)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116719230 (pole3)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116719230 (pole3)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116719230 (pole3)
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
116719230 (pole3)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
116719230 (pole3)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
116719230 (pole3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
SpoU_methylase
CIS_TMP
DUF4746
PPP4R2
Nop52
RNA_pol_3_Rpc31
DUF5427
RNA_pol_Rpc4
DDHD
CDC45
Motif
Other DBs
NCBI-GeneID:
116719230
NCBI-ProteinID:
XP_032417606
LinkDB
All DBs
Position
4:763593..766603
Genome browser
AA seq
150 aa
AA seq
DB search
MAERPEDLNLPNAVITRIIKEALPDGVNVSKEARRAISQAASVFVLYATSCANNFAMKAK
RKTLNAGDVLAAMEEMEFERFLEPLRDALEVYKKDQRGRKEVSEQKRRDKERKADSENEK
SREEEEEEEEEQQRMEEEPEEEAEEEEEDN
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggccagaggacctgaaccttcccaacgcggtgatcacccgcatcatcaag
gaggcgctcccagatggggtgaacgtgtccaaagaggcccggcgcgccatctcccaggcg
gccagcgtcttcgtgctgtatgcaacctcctgcgccaataactttgctatgaaggccaag
aggaagacgctgaacgcaggagacgtgctggcggccatggaggagatggagttcgagcga
ttcctggagccgctgcgggacgctctggaagtgtacaagaaagaccagagggggaggaag
gaggtgagcgaacagaaacgcagagacaaggagaggaaggccgactccgagaacgagaag
agcagagaggaagaggaggaggaagaggaggagcagcagcgcatggaggaggagcctgag
gaggaagctgaggaagaggaggaggacaactga
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