Xiphophorus hellerii (green swordtail): 116719262
Help
Entry
116719262 CDS
T07363
Name
(RefSeq) cadherin-related family member 5-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116719262
Cell adhesion molecules [BR:
xhe04515
]
Cadherins
Cadherin related
116719262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116719262
NCBI-ProteinID:
XP_032417644
LinkDB
All DBs
Position
4:2238146..2247371
Genome browser
AA seq
720 aa
AA seq
DB search
MELKSKKQPADVLLGCIVAFCFSTPCWAQRLCTVPPGPVTIPENNTADIQVVKIISSSDA
TLSVSVNPEDLFYVKGNVLMVKKGLDYESLSSPTLVVWVKCSKAGSSSVNESVEVLVENV
NDNPPNFAQNHYVLDVNELAPVNSSVGLIEATDVDSEPLYYRLESATTQISQEKYFRLEN
INTPKILVKSLLDYDVVQKISLVLHVQVQEGRSSVFLLVCSLTFIFHSQDTFNGSASNEP
FFTSVATITVQVRDVDNRPPWFQPCLRTSLGLAKLCVSGGYRGKVNLTEKEEGPLVLEPG
PVFARDGDRNRSEPISYRMLRGNEGNIFQIDEDTGNITMTKAADIVGPIILTILASQVNN
RDQFAVTQVTIEVMKKSRNPPRFEKERFEGFIYSNSIPESMILRDRTTNRPFRVRARDED
FASGLNPDMKYEVQYSSYVNVTPDGFVILKRVVKTESFALQLRAVDSVTGEFGTAALSVQ
VIPAVAVPSPSNIGYRPGDMALLGLIMAALLVLSLIVIGFLISRLWKENTSLEKICECLG
PCLRSDRPRSGHRDSLQFTNDGFQNEADPSRGKRWNNVLPRRSTFPQPRSRILPLERRSR
HCSTCGVYANHVTKGSPSVRRSRSDGDEYGMRSILSKQRRKEGQKTVWFKESEDSSDIEV
EIIPDSVGRVEEETEEELEVEMEGVVRDPAAPLRDPETERENQSDEPDPGDGSEEKEQER
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaatccaagaagcaacctgcggacgttctgctcggatgcatcgtcgccttc
tgcttttccacgccgtgctgggctcagagactctgcacggtgccgcccggcccggtaacc
atccctgaaaacaacacggccgacatccaggtggtgaagatcatctccagcagcgatgcg
actctgagcgtctcggtgaacccggaggatctgttctacgtcaaaggcaacgtcctgatg
gtgaagaaaggcctggattacgagtccctttccagtcccactctggtggtttgggtgaag
tgcagcaaagccggctccagttctgtgaacgagtctgtggaggttctggtggaaaacgtg
aacgataatcctccgaacttcgcccagaaccactacgttctggacgtgaacgagctcgct
ccagtgaactccagcgtcggactcatagaagcaacggatgttgattcagagccgctttat
tatcgcttagagtctgcaactacacaaatttctcaggagaaatatttccgtctggagaac
atcaacacaccaaagatccttgtgaaaagcctcctggactacgatgtggtgcagaagatc
tctctggtgttgcacgttcaggtacaggaaggacgttcgtctgtttttcttttggtttgc
tccctgacgtttatcttccactcccaggacacgttcaacggttcggcctccaacgagccg
ttcttcacctccgtggccacgatcacggtccaggtgagggacgtggataaccggccgccc
tggttccagccgtgtctcaggacaagcttaggactggccaagctttgcgtcagcggcggc
tacagaggcaaagtcaacctgaccgagaaggaagaaggcccgttggttctggagcccggc
ccggttttcgccagagatggagacaggaaccgcagcgagccgatcagctacaggatgtta
cgagggaatgaagggaatatattccaaattgatgaagacacagggaacattacaatgacc
aaagctgcagatatcgttggcccaatcattctgacaatcctggcttcgcaggtgaacaac
agggatcagtttgcagtgactcaggtgaccatagaggtgatgaagaagagcaggaaccct
ccgcgctttgagaaagagcgattcgagggattcatctacagcaactccatcccagagagc
atgatactccgagaccggaccaccaacagacccttcagggtccgagcccgcgacgaagac
ttcgcaagtggtctgaacccggacatgaagtatgaggttcagtacagcagctacgtcaac
gtgactcccgacggcttcgtgatcctgaagagagtggtgaagacggagtccttcgccctt
cagctcagagccgtggattcggtcacaggagagtttgggactgcagcgctctctgttcaa
gtcatacctgccgtggccgtcccgtctccgtcgaacatcggctatcggcccggcgacatg
gcgctgctcggtctcatcatggcggctctcctggttctctccctcatcgtgattggcttc
ttgatttcccgcctgtggaaggaaaacacgagtctcgagaaaatttgtgagtgcctgggt
ccctgcctgcggtccgaccggcctcggtccggccacagagactccctccagttcaccaac
gacggattccagaacgaggccgacccgagccgaggcaaacgctggaacaacgtgctgccc
cggcgcagcaccttcccccagccccggagccgcatcctgcccctggagaggcggagccgc
cactgctccacctgtggcgtctacgccaaccacgtcaccaaggggagcccatcggtgcgg
aggagcaggagcgacggcgacgagtacggcatgaggtccatcctgtccaagcagcgccgc
aaggaggggcagaagacggtgtggttcaaggagagcgaggactcctcggacatcgaagtg
gagatcatccccgactcggtgggccgggtggaggaggagacagaggaggagctggaggtg
gagatggagggggtggtgagagaccccgccgccccgctcagagacccggagacggagcgg
gagaaccagagcgacgagccggatccgggagacggctcggaggagaaggagcaggagcgc
tga
DBGET
integrated database retrieval system
