Xiphophorus hellerii (green swordtail): 116719267
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Entry
116719267 CDS
T07363
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116719267
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116719267
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116719267
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116719267
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116719267
NCBI-ProteinID:
XP_032417650
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Position
4:complement(2077702..2126326)
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AA seq
530 aa
AA seq
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MESSRQDSVTDAVRSRSQPGEAAAETPLPAAGRTHSRSDSSGSSQSKGLSAAVKKTHASQ
IEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNASYSCPRQKNCQIDRTSRNRCQH
CRLQKCLAAGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQQAPSRTSLSVGSPSPDEA
DPPSPPYTLCSAGLTDPADDPACYTDRTSPDGVSLTAKAESGAGDTRCGGFYLDIQPSPD
QSGLDINGIKPEPLYDYGHGDDFFPYCSFSNGDASPTLTVAEHDHLAQIICKSHLETCQY
LREELQEMSWQSFLQEEVEKYQNKPQEAMWQLCAVKITDAIQYVVEFAKRIDGFMDLCQN
DQIVLLKAGSLEVIFVRMCRVFDSQNNTVYFDGKFASPDVFKSLGCDDLISSVFDFAQSM
CSLQLTEEEFALFSAFVLLSADRSWLREKLQVEKLQRKTESALQHVLQKNRRDDGVLEKL
RCKASALRALCGLHSEKLAAFRTVYPDAVRTLFPPLYKELFAADLDGTLH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtcccgacaggattcggtgactgacgcggtaaggagtcgctctcagcccggt
gaagccgccgcggagaccccgctccccgcagcgggcaggacgcacagccgctccgactcc
tccgggtccagtcaaagcaaaggtttgtcagcagctgtgaagaagacgcacgcttctcag
attgagatcatcccctgtaagatctgtggagataaatcctcagggatccactatggcgtc
attacctgcgagggctgcaagggtttcttcaggcggagtcagcagagcaacgcctcgtac
tcgtgtccgcggcagaaaaactgtcagatcgaccgaacgagccggaaccgctgccagcac
tgtcgcctgcagaaatgcctggctgccggcatgtccagagacgccgtgaagttcggccgc
atgtcgaagaagcagcgggacagtttgtacgccgaggtccagaagcaccggctccagcag
cagcagcaggcgcccagccggacctccctcagcgtcggcagccccagcccggacgaggcc
gacccgccgtcccccccgtacacgctgtgctccgcgggcctcacggacccagcagacgac
ccggcctgctacacggaccggacctcaccagacggagtatctctgaccgccaaggcagag
tcaggagcaggagacacaagatgtggaggtttctacctggacatccagccgtctccggac
cagtccggactcgacatcaatggaatcaaaccagagccgctgtacgactacggacacggc
gacgacttcttcccttactgctccttcagcaacggagacgcttctccaaccctgaccgtg
gccgaacacgatcacttggctcaaatcatctgcaagtctcacctggagacgtgtcagtac
ctgagggaggagctgcaggaaatgagctggcagagtttcctgcaggaagaggtggagaaa
tatcagaacaagccacaggaggcgatgtggcagctttgtgcggtgaagatcacagacgcc
atccagtacgtggtggagttcgccaagcgcatcgacggcttcatggatctctgccagaac
gaccagatcgtgctgctgaaagccggatctttagaggtcatcttcgtacgaatgtgtcgg
gtttttgactcccagaacaacaccgtctacttcgatgggaaatttgcaagtcctgacgtt
ttcaaatcattaggctgcgatgatttgatctcgtcggtgtttgacttcgctcagagcatg
tgttcgctgcagctgaccgaggaagagttcgccctcttctccgcgttcgttctgctctct
gcagaccggtcgtggctgcgggagaagctgcaggtggagaagctgcagcggaaaaccgag
tcggccctgcagcacgtcctgcagaagaaccgcagagacgacggggttctggagaagctg
cggtgcaaggcatcggcgctccgcgctctctgcggcctccactcggagaagctcgcggcg
ttcagaaccgtctacccggacgcggtccgaacgctcttccctccgctctacaaggagctg
tttgctgccgacctggacgggactctgcactga
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