Xiphophorus hellerii (green swordtail): 116719310
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Entry
116719310 CDS
T07363
Symbol
vegfc
Name
(RefSeq) vascular endothelial growth factor C
KO
K05449
vascular endothelial growth factor C/D
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
xhe04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116719310 (vegfc)
04020 Calcium signaling pathway
116719310 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116719310 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xhe04052
]
116719310 (vegfc)
Cytokines and neuropeptides [BR:
xhe04052
]
Cytokines
Growth factors (RTK binding)
116719310 (vegfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
116719310
NCBI-ProteinID:
XP_032417687
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All DBs
Position
5:5282522..5327045
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AA seq
420 aa
AA seq
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MHLLGISLFLAYLLYTNLASDFSHRDYDDEYAEQEPMDEPDTLPKPDMEQKLRSASSVDE
LMSLIYPSYWAALKCRSKLSAAASSASKFTQRPQTHRLRPLSEAEEPTYAAAYLNLDVLK
SIELEWRKTQCMPREVCVDVGREFGAPTNVFYKPPCVSVYRCGGCCPSEDKQCRNISTGY
LSKTLFEITVPLTQGTKPVTISVANHTQCSCLSKLDIYRQVHSIIRRALPECAIANRTCP
PGQVWNTKQCQCISMASVVKPPPPPLLHLRSPQQPHDILSSDLCGPDKELDVESCQCVCR
LENPTRDCGPKRHLDRNTCQCVCNMLPAPSCPQNHIFNKETCQCTCNKTCPRHQPLNKTK
CSCECNESPNKCFLRGRRFHQATCSCLRPPCEVRRRKCEAGFFFSEEVCRCVPSHWRRLD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttttgggaatatctctgtttctggcatatttgctctacactaacctggccagc
gacttcagccacagagactatgatgatgagtacgcggagcaggagccgatggacgaaccg
gacacattaccaaagccggacatggagcagaagctgcgttcagcctccagtgtagatgaa
ctgatgagtctgatctatccttcatattgggctgctctgaagtgcagatccaaactttct
gccgctgcatcctcagcctccaaattcactcagaggccacagactcaccggctgcggccg
ctttctgaagccgaggagccgacatacgctgctgcctacctcaacttggatgtccttaaa
agtatagagttggagtggaggaaaactcaatgcatgcccagagaagtgtgtgttgatgtg
ggcagggagttcggggctcccaccaacgtcttctataagccaccgtgtgtgtctgtatat
aggtgtggaggatgctgcccctccgaggacaaacaatgcagaaatatctccaccggttac
ctcagcaaaactctctttgagatcacagtgcctctgacccagggcaccaagcctgtaacc
atcagcgtggccaaccacacccagtgcagctgtctgtccaaactggacatttacagacaa
gttcacagcatcatcaggcgcgccctgccagagtgtgcaatagccaacaggacgtgtccg
cctggccaggtgtggaacactaagcagtgtcagtgtatcagcatggcttcggttgttaag
ccccctcctccaccactgcttcatctacgatcacctcagcagccccatgacatactctca
tcagatttgtgtggcccagataaagagctagatgtggaaagctgtcaatgtgtatgccgt
cttgaaaatccaactcgtgactgtgggcctaagcgacacttggaccgaaacacttgccag
tgcgtctgcaacatgctgcctgctccttcctgcccccagaaccacatcttcaacaaagag
acttgtcagtgcacgtgcaataagacctgtccgaggcaccagcccctaaacaagacgaaa
tgctcctgtgaatgtaacgagtcaccaaataagtgttttctgagaggaagaaggtttcac
caagcaacatgcagttgtcttaggcctccatgtgaggtgaggagacggaagtgtgaagca
ggtttcttcttcagtgaggaggtgtgtcgctgtgtcccctcgcattggaggcgcttggac
taa
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