Xiphophorus hellerii (green swordtail): 116719361
Help
Entry
116719361 CDS
T07363
Name
(RefSeq) B-cell receptor CD22-like isoform X1
KO
K06467
CD22 antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116719361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116719361
04090 CD molecules [BR:
xhe04090
]
116719361
04091 Lectins [BR:
xhe04091
]
116719361
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SIGLEC family
116719361
CD molecules [BR:
xhe04090
]
Proteins
116719361
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116719361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
V-set
Ig_4
Ig_5
Ig_CD22
C2-set_2
Ig_C17orf99
Ig_6
C2-set
Motif
Other DBs
NCBI-GeneID:
116719361
NCBI-ProteinID:
XP_032417749
LinkDB
All DBs
Position
5:26611578..26617645
Genome browser
AA seq
486 aa
AA seq
DB search
MSFSAAIRGVIVLLMAADVCGQNVWGVTFSRPSICALKGSTVEMSCKYIYPAKYENINIV
IEKTFWFTKVINGDFVDLKDDTDYSGRVEYSCINTFCSLKIFNVRQTDSKEYKFRFISDH
PTGKYMGSPGVSLSVTDPQVKVNRLNNPIRIQLTCHTDCQLDPPVSYVWLEDGKANKESN
NNLVLSSFNTTHRYQCAIKGHEDVPSPAVYAPQTIVLSVTPSETVEGSKVTLTCSSDANP
AAKYNIYRVNEDQHGQLVSTEIQPVFSSIQVSDSGRYYCAAGNDLGSRTSPSININVKYG
PKNCSVSVNPSGSVEEGNPVTLTCTSDANPAANYTWYKENKIIANGSEVFHVLAVGSEHR
RRYSCKAQNLHGECNSSSRFLDVLYAPNVSVSITPSGEIKEGNPVILTCSSDANPAANYT
WYKEKDNKLLESNKNLTFDSIKSMDSGQYYCTAINKMGQKNSTVNVDVKCTQSHIKECLP
LMNFIF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcagcagcgatccgtggagttatcgtccttctcatggcagcagatgtttgt
ggtcagaatgtttggggagtgacttttagtcgtccttccatttgtgccctaaaaggatca
acggtggaaatgagctgcaaatatatttacccagccaaatacgagaacataaatattgtt
atagagaaaacattttggtttacaaaagtgattaatggagattttgtggatctgaaagac
gacacagattattcaggtcgtgtggaatacagttgcattaacactttctgctctctgaag
atctttaatgtgagacaaactgactcaaaagagtacaagttcaggttcatatcagaccat
ccaactggaaaatacatgggttcacctggagtctctttatctgtcacagatccacaggtg
aaggtaaacagattaaataatccaatcaggatccagctgacatgtcacactgactgtcag
ctggatcctccagtttcctacgtctggctggaggatgggaaagcaaacaaagaaagtaac
aataatttggtcctgtcctcatttaataccacacacagatatcagtgtgcaataaaagga
catgaggatgttccatctcctgcagtgtatgctccacagaccatcgttctgtcagtgacc
ccctcagaaactgttgaaggctctaaagtgactctgacctgcagcagtgatgctaatcca
gcagctaaatacaacatttacagggtgaatgaagatcaacatggtcaacttgtcagcaca
gaaatacaaccagtcttcagctccatccaggtctctgattctgggaggtattactgtgca
gctggaaatgaccttgggagccggacgtctccaagtatcaatattaatgtgaaatacggt
ccaaagaactgttctgtgtcggtgaacccctctggatcagtagaggagggaaacccagtg
actctgacctgtactagtgatgctaacccagcagctaactacacctggtacaaggagaat
aaaatcattgctaatgggtctgaggtttttcatgtcctcgctgtcggctctgagcacaga
agaagatactcttgcaaggctcagaacctgcatggagaatgtaactcttcatctcggttt
cttgatgttctctatgccccaaacgtctctgtgtccataactccttcaggagagatcaag
gagggaaacccagtgattctgacctgcagcagtgatgctaatccagcagctaactacacc
tggtacaaggaaaaagacaacaaactcctggaatcaaataaaaatctcaccttcgactcc
atcaagtcgatggattctgggcaatattactgtacagccataaacaagatgggacaaaag
aactcaacagtcaatgttgatgttaaatgtacgcagtcgcacattaaagaatgtcttcca
cttatgaactttatattttga
DBGET
integrated database retrieval system
