Xiphophorus hellerii (green swordtail): 116719376
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Entry
116719376 CDS
T07363
Name
(RefSeq) uncharacterized protein LOC116719376
KO
K06467
CD22 antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116719376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116719376
04090 CD molecules [BR:
xhe04090
]
116719376
04091 Lectins [BR:
xhe04091
]
116719376
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SIGLEC family
116719376
CD molecules [BR:
xhe04090
]
Proteins
116719376
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116719376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Izumo-Ig
Ig_CD22
V-set_CD47
DUF4703
dbPDZ_assoc
Motif
Other DBs
NCBI-GeneID:
116719376
NCBI-ProteinID:
XP_032417764
LinkDB
All DBs
Position
5:27310366..27313068
Genome browser
AA seq
529 aa
AA seq
DB search
MMFLSAAGCVWMVYILCISGVEGKPNSIFALKGSSVNLSCSAPHSAAKVKWYMVSKSNAE
YVYHDVSAHRNHEEFSLSEDDFTLTIRDLTEDKTKSYCCSETIPKERPDETDSCQQNSIQ
LQVIDLQVKVFPASEGQKVSLMCSSSCSLTESPAAFIWYQNGEFLYEDWSPWYQELVSSD
QAVRYSCAIKGYEDLRAPDVSVDSVSGSCFSVTYAEGTMCSYKSQKQSCSITFPTEIRVE
RTESENDHIKMTCNSSCSLTDNKTSFQLYENTETGEQKVDQNSVVPISSTDSFFCTVKDR
HDLLSNEVCVNGSDCWTVNYDSRRICGLKGSSVNISSKYSHPEHQQPLTKRWYKMKINTK
LEEEVMENNTDVNYQDDTRNQHILSLNNLDEKNSGEYEFRIKTDIRKSSHFPGVTLIVTG
LLVDVRPAAEVTEGQRVTLTCSTSCPLSENTNYIWYFNSRPLSLTKTRNNHLIIDAVSRQ
DEGNYSCSVETLNSPGKTLTVQQSTTTSSATTVNWIRTAAGLSVFLLVL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttttatcagcagctggatgtgtgtggatggtttatattctctgcatctcaggt
gttgaaggaaaaccaaacagcatctttgctttgaaaggatcatcagtgaatctgagctgc
tcagctccacattcagctgcaaaggtcaaatggtacatggtgagcaagagtaatgcagaa
tatgtttatcatgatgtgtctgcacatagaaatcatgaagagttcagtttatcagaggat
gatttcactctgacaatcagagatctaacagaggacaagacaaaaagttactgctgtagt
gaaactattcctaaagagagaccagatgaaaccgacagctgtcagcagaacagcattcag
ctccaggttatagacctccaggtaaaggtgtttcctgcctcagagggacagaaagtgagt
ctgatgtgctcaagcagctgttctctgactgaaagccctgcagccttcatctggtaccag
aacggagagttcctctatgaggactggtccccctggtaccaagagctggtcagcagtgat
caggcagtcagatactcctgtgctatcaaaggctacgaggatctcagagctcctgacgtc
tcagtggattctgtctcagggagctgcttcagtgtgacctacgctgaaggcacaatgtgt
tcctacaaatcacagaaacagtcctgctccatcacatttcctacagaaattcgtgttgaa
aggacagaatcagagaatgaccatatcaagatgacgtgtaactccagctgttctctgact
gacaacaaaacttcatttcagttgtatgaaaacacagaaactggtgaacagaaagttgat
caaaactctgtagttcccatctcatcaacagatagcttcttctgcactgttaaggatcgt
catgatctgctttctaatgaagtttgtgttaacggtagcgactgctggactgtgaattat
gacagcaggagaatctgtggcctgaaaggttcatcagtgaacatctccagcaaatactca
catcctgagcaccaacagccactgactaaacgctggtataaaatgaagataaatacaaag
ctggaggaagaggtgatggagaataatactgatgtgaattatcaggatgacacgaggaac
caacacatcctcagtttaaacaacctggatgagaaaaactcaggagaatacgagttcaga
atcaaaacagacatcagaaaatcatctcattttcctggagttactctgattgtaacaggt
ctcctagtggatgtgcgacctgctgcagaggtcactgagggtcagagagtcacattgacc
tgcagcaccagctgtcctctcagtgaaaacacaaactacatttggtactttaacagtcgg
cctctgagtctgactaaaacacgaaacaaccatctgattatagatgcagttagcagacag
gatgaaggaaactactcctgttctgttgaaacgctaaactcacctggaaagactctgact
gtacaacagtcaacaacaacctcttcagcaacaacagtaaactggatacgaacagctgca
ggactctctgtgtttcttttggtcctg
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