Xiphophorus hellerii (green swordtail): 116719463
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Entry
116719463 CDS
T07363
Name
(RefSeq) integrin alpha-L-like
KO
K05718
integrin alpha L
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
xhe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116719463
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116719463
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116719463
04515 Cell adhesion molecules [BR:
xhe04515
]
116719463
04090 CD molecules [BR:
xhe04090
]
116719463
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116719463
Cell adhesion molecules [BR:
xhe04515
]
Integrins
Integrin alpha subunits
116719463
CD molecules [BR:
xhe04090
]
Proteins
116719463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
DUF6418
Motif
Other DBs
NCBI-GeneID:
116719463
NCBI-ProteinID:
XP_032417869
LinkDB
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Position
5:17248727..17266571
Genome browser
AA seq
1167 aa
AA seq
DB search
MYAPGRFYLLIYMILTAAAIPITSAFNIDTTNSTVLPGKKEDFFGYKVLQYESPKNKGVI
VTAPLRLNGSGGISKLDQNGTELWFNGSSHPYSAKHLGLSIATDTKSGFIACSPSLAHPC
DENVYLNSLCYNITDDFELISSFKPLFQKCIEKVVNLVFLFDGSESMTEGEFNKNKKFII
DIMNQLKNTSFKFAAVQFSTSCRTVFNFNDYADGTAQDKLTKEQHMKGLTNTHKALNFTL
HNLLENESAGASKNANKAVVIITDGDPSDLDKSFQSVATYNRKEITRVVIGVKIKDDQFS
KLKTIASEPKDNNVFKIENYDGLTGILGSLQKQIFAIEGSNRTRSDKLNTQMAQSGFSVV
SHKDTLVLGSVGSNTWRGTLNEYKTQNKVILDPDMQEASYMGYTLSVGERNGISLYFTGA
PRFNHMGQVVVFRRDEDKWPVVQRITVDQIGSYFGAELCSVDIDTDGNTDFLLVGAPMFF
LPEERKEGSIYIYAISDKINLMRVLQVKAPSMGRFGTTISSLADLNGDGLRDVAVGAPLE
EKNAGAVYIYLGQRGTGMRNISSQRITGAQFNLGLRFFGQSINGDIDLGKDRLPDIVVGF
QGAAVVLRSKPVLDVKAKLSFYPNVISIQEINCLDKTEDKPLPMTNITACFEMVEVTNST
AGPGIKISLMLNVDPMRQSNRGFFIENGANSRNIIQTHELTDKETCFNYFISMNKCIQDT
LSPVNIKLNFSQDFNSNSTAILSIDSQIQAMVEVPFEKHCEKEICIADLKVDFNFQSEEL
LVTKDSSIKIWIKLDNMADDSYNTSLTMLYPQGLSFSMLDQKGNKKLTQICADQEKLNET
ICGISLPVYRSKSSAEFIATFRTKDFEWNDTLPMTVFAESENSNSSKSSSMTKSIPVKYA
VEMAIAVNDTSDDNLKFTPENYTTQKLSTVYNIRNTNFKDFPISVFLFFQEKLEHDFEMT
NYKVIVKPNKTQCSKFSTPKAEDCPWKENCVAIKCDTFMLKNYSDVYISLLGDVHFRNLK
NYESNMPFLKKYTGVHGEVKFNSSIKVRYDGSRYMMKQEKNKNYAIEKSTEVVVEFKVSQ
HRNLIIATGVIMGFILLIILTIIMWKCGCFKRKTIEDFNEEMAAQKIPSSLKKVEQVKEE
KKPLNADKDKEDKPPANPEGVCENVDL
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaccagggcgcttctatctgctcatctacatgatactgacagctgcagccatc
ccaattacttcagctttcaacattgatacaacaaactctaccgttcttcctggcaagaag
gaagatttctttggatacaaggtgcttcagtacgagtcacccaagaacaaaggggtaatc
gttactgcaccgctgcggctaaatgggtcagggggcatctccaagctcgaccaaaatggc
actgaattgtggttcaatggttcttcacatccgtattcagccaagcatcttggcttgtca
atagccacggatacaaaatccgggtttattgcctgcagtccaagccttgctcatccatgc
gatgagaatgtctacctgaacagtttgtgttacaacatcacagatgattttgagctgatc
tcttctttcaagcctttgttccaaaaatgcatagaaaaggttgtaaaccttgtgtttctg
tttgatggatccgagagcatgactgaaggagaatttaataaaaataaaaaattcataata
gacataatgaaccaacttaaaaacacatctttcaagtttgcagcagttcagttctcaaca
tcgtgcaggacagtgttcaactttaatgattacgctgatggtactgctcaagacaaactt
accaaagaacagcatatgaagggtctaaccaacacacacaaggcccttaactttacactg
cacaatctcttggaaaatgaatcagcaggagcctcaaaaaatgcaaataaagctgtggtg
ataatcacagatggagatccaagtgatctggataaaagtttccagagtgttgcaacctat
aatcgcaaagagatcactcgagttgttattggggttaagattaaagatgatcaattcagc
aaattaaaaacaattgcatcagaaccaaaagacaataatgtgttcaaaattgaaaactat
gatggacttactggaatactgggaagtttgcaaaaacagatcttcgctatagaaggatct
aataggactcgatctgataaactgaatactcaaatggctcaaagtggattcagtgttgtc
tcacacaaggacaccttggttctgggctcagtgggatcaaacacctggcgtgggactctc
aatgagtataagacacaaaacaaggtgattttagacccagatatgcaagaggcctcctac
atgggatacactctttctgttggagaaagaaatggcatttctttatatttcactggcgct
ccacgtttcaaccacatgggacaggttgtagtttttcgacgtgatgaagacaagtggcca
gtagtccaaagaataactgtggaccagattggctcctattttggtgcggagctgtgctct
gtggacattgacacagatggtaacactgatttcctgctggttggcgctccaatgtttttc
cttcctgaggagagaaaagaagggtcgatctacatctacgcaatatctgataagatcaac
ttaatgagggtgcttcaagtgaaagcaccgtccatgggtagatttggcaccaccatatcc
agtcttgcagatctgaatggagatggtctccgagatgttgcagtgggagcccccctggaa
gagaaaaacgctggagcggtctacatctaccttggacaaagaggcacagggatgcgcaac
atttccagccagagaatcacaggagcacaatttaatcttggattgagattttttggtcag
tccatcaatggagacatcgatctcggaaaggataggttgccagatattgtggtgggattc
caaggtgctgctgttgtcttaaggtccaaacctgtgttagatgtcaaggctaagctgtca
ttttatcccaacgtgataagcattcaggaaatcaactgcttggataagacggaggacaaa
ccattaccaatgactaacataacagcttgctttgaaatggtagaagtaacaaacagcact
gcagggccaggaatcaagatctcactcatgctcaatgtggatccaatgaggcaatcaaat
cgaggtttcttcattgaaaatggagcaaatagccggaatattatacaaacccatgagctg
actgacaaggaaacatgcttcaactattttatctccatgaataaatgcatacaagacaca
ttatctcctgtcaacatcaagctaaacttttcccaagatttcaacagcaattcaacagcc
attcttagcatagacagccaaatacaggcaatggttgaggttcctttcgaaaaacactgt
gaaaaagaaatctgcattgctgatcttaaagtggattttaattttcagtctgaggaacta
ttagtgacaaaagatagcagcatcaaaatatggataaaactcgataatatggctgatgac
tcatacaacaccagcctgacgatgctctaccctcaaggcctctctttctcaatgttggat
caaaaagggaacaagaaactaactcaaatctgcgcggaccaagaaaaacttaatgagacc
atttgtgggataagccttcctgtatatcgcagcaaatcctctgccgagtttattgctact
tttcgcaccaaagattttgagtggaatgacacattgccgatgacagtctttgcagaaagt
gaaaattctaactccagcaagagttcttctatgaccaaaagtattcctgtaaaatatgct
gttgaaatggcaatagcagtaaatgacacatctgatgacaacctgaagttcactccagaa
aattatacaacacaaaaactgtcaactgtatacaatatacgcaacacaaattttaaggat
tttcccatcagtgtattcctcttcttccaagagaaactggaacacgactttgaaatgaca
aactataaagttattgtcaagccaaataaaactcagtgctcaaagttttccaccccaaaa
gctgaggactgcccatggaaagaaaactgtgtggccataaaatgcgatacatttatgtta
aaaaactattcagatgtttacatttccctgttgggggatgtgcatttccgaaatctgaaa
aactacgaatcgaatatgccctttctgaaaaaatatactggagtccacggagaggtcaaa
tttaacagctctataaaagttcgctatgatggtagtagatacatgatgaaacaagagaaa
aacaagaactacgcaatagaaaaatcaactgaagttgtagttgaatttaaggtgtctcaa
catagaaatctgatcattgcgactggtgtgataatgggatttatccttctgatcatactc
acgatcatcatgtggaagtgtggctgctttaagaggaaaaccattgaggatttcaatgag
gaaatggctgctcagaaaataccctcatctcttaagaaagttgaacaagtgaaagaggaa
aaaaaacctcttaatgcagataaggacaaagaagacaaacccccagctaatcctgaagga
gtctgtgaaaacgtggatctttag
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