Xiphophorus hellerii (green swordtail): 116719476
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Entry
116719476 CDS
T07363
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116719476
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116719476
04090 CD molecules [BR:
xhe04090
]
116719476
04091 Lectins [BR:
xhe04091
]
116719476
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SIGLEC family
116719476
CD molecules [BR:
xhe04090
]
Proteins
116719476
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116719476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_5
Ig_4
V-set
C2-set_2
Ig_CD22
Ig_6
Izumo-Ig
PKD_3
Adeno_E3_CR1
GBS_Bsp-like
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
116719476
NCBI-ProteinID:
XP_032417890
LinkDB
All DBs
Position
5:26599928..26607938
Genome browser
AA seq
613 aa
AA seq
DB search
MSFSAAIRGVIVLLMAADVCGQNGWGVTFSRSSICALKGSTVEMSCNYIYPAKYGNINIV
IVKTFWFTKVINGDYVDLKDDSDYSGRVEYSCIKTFCSLKIFNVRQTDSQEYKFRFITNH
PTGKYVGSTGVSLSVTDPQLQVKVNRLNDPIRIQLTCHTDCQLPHPVSYVWLEDGKANKE
NNNNFVLSSFNTTHRYQCAIKGHEDVPSPAVYAPQTTVLSVTPSETVEGSKVTLTCSSDA
NPEANYNIYRVNEDQHGQLVSTEIQLVFSSIQVSDSGRYYCTAGNDLGSRTSPSIDINVK
YGPKNCSVSVNPSGAVEEGNPVTLTCTSDANPAANYTWYKENKIIANGSEVFHVLAVGSE
HRGRYSCKAQNLHGECNSSSRFLDVLYAPNVSVSITPSGEIKEGNPVILTCSSDANPAAN
YTWYKEKDNKLLESNKNLTFDSIKSMDSGQYYCTAINKMGQNTSRVNVDVKYAPRSPSVS
QSPSGDIVVGSSVTLTCSSDANPAANYTWYKEGEKAQKDSEENFTITNIQNEHSGNYYCK
VQNKIGHHNTSVSVTVVPGQPISTITCRLALLILISMLVLITFRRTLKTMKKPTKLSDPV
EMMEMRNVIEITE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcagcagcgatccgtggagttatcgtccttctcatggcagcagatgtttgt
ggtcagaatggttggggagtgacttttagtcgttcttccatttgtgccctaaaaggatca
acggtggaaatgagctgcaactatatttacccagccaaatacggcaacataaatattgtt
atagtgaaaacattttggtttacaaaagtgattaatggagattatgtggatctgaaagac
gactctgattattcaggtcgtgtggaatacagttgcattaagactttctgctctctaaag
atctttaatgtgagacaaactgactcacaagagtacaagttcaggttcataacaaaccat
ccaactggaaaatacgtgggttcaactggagtctctttatctgtcacagatccacagctc
caggtgaaggtaaacagattaaatgatccaatcaggatccagctgacatgtcacactgac
tgtcagctgcctcatccagtttcctacgtctggctggaggatgggaaagcaaacaaagaa
aataacaataattttgtcctgtcctcatttaataccacacacagatatcagtgtgcaata
aaaggacatgaggatgttccatctcctgcagtgtatgctccacagaccaccgttctgtca
gtgaccccctcagaaactgttgaaggctctaaagtgactctgacctgcagcagtgatgct
aatccagaagctaactacaacatttacagggtgaatgaagatcaacatggtcaacttgtc
agcacagaaatacaactagtcttcagctccatccaggtctctgattctgggaggtattac
tgtacagctggaaatgaccttgggagccggacgtctccaagtatcgatattaatgtgaaa
tacggtccaaagaactgttctgtgtcagtgaacccctctggagcagtagaggagggaaac
ccagtgactctgacctgtactagtgatgctaacccagcagctaactacacctggtacaag
gagaataaaatcattgctaatgggtctgaggtttttcatgtcctcgctgtcggctctgag
cacagaggaagatactcttgcaaggctcagaacctgcatggagaatgtaactcttcatct
cggtttcttgatgttctctatgccccaaacgtctctgtgtccataactccttcaggagag
atcaaggagggaaacccagtgattctgacctgcagcagtgatgctaacccagcagctaac
tacacctggtacaaggaaaaagacaacaaactcctggaatcaaataaaaatctcaccttc
gactccatcaagtcgatggattctgggcaatattactgtacagccataaacaagatggga
caaaacacctcaagagtcaatgttgatgttaaatatgctcccagatctccttcagtgtct
cagagtccatctggtgacatcgtggtgggtagctccgtgactctgacatgtagcagtgat
gctaacccagcagctaactacacctggtacaaggagggagagaaggcacaaaaagattca
gaagaaaacttcaccatcaccaacatacaaaatgaacacagtgggaactattactgtaaa
gtccagaacaagataggacatcataacacctctgtatctgtgactgttgtgccaggtcaa
ccaatatcaacgatcacctgcaggttggctctattgatcctgatttctatgcttgtcctg
attacttttagaagaaccctgaaaactatgaaaaaacccacaaaactatctgatcctgta
gaaatgatggagatgagaaatgttattgagatcacagagtga
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