Xiphophorus hellerii (green swordtail): 116719491
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Entry
116719491 CDS
T07363
Symbol
pdlim3
Name
(RefSeq) PDZ and LIM domain protein 3
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116719491 (pdlim3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116719491 (pdlim3)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116719491 (pdlim3)
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Ortholog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
FYVE
Motif
Other DBs
NCBI-GeneID:
116719491
NCBI-ProteinID:
XP_032417910
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All DBs
Position
5:31478433..31491304
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AA seq
315 aa
AA seq
DB search
MPLNVVLDGPPPWGFRLTGGKDFNQPLTISRITPGSKASGAKLCAGDIILAIEGAPAVDM
LHCEAQSKIKECFNQLCLTVERNESMLWSPRVVEDGRAHPFKLNLESEQQEYKPIGTAHN
RKAQPFVAAANIDDKRQVVSTSYNTPIGLYSSGNIQDAMQGQIRGLVLPKPESPRTLTNI
EESDVYRMLQRDQDDPPEPRQSGSFKALQEFIDSDGTRPIVTRTVKAPTTKPAAPSGNLQ
KLPVCDKCGNGIVGTVVKARDKCRHPGCFVCADCDVNLKQKGYFFVESQLYCEIHARARM
RPPEGHDLVTTFPSS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaacgtcgtcctggatggaccccctccctgggggtttcggctgacaggagga
aaggacttcaaccagccactgaccatctccaggatcactcctggcagtaaagcttccggg
gccaagttatgtgctggggacatcatcctggccatcgagggggccccggctgtggacatg
ctgcactgtgaggcccagagcaagatcaaggagtgtttcaaccagctctgccttactgtg
gagaggaacgagtcaatgctgtggtccccgcgggtggtagaggatggaagagctcatccg
tttaaactcaacctggaatcagaacagcaggaatacaagccgatcggaactgctcacaac
cggaaagctcagccgtttgtggcagcagcaaacatcgacgacaagaggcaggtggtcagc
acgtcctacaacactcccatcggcctgtactcctccggcaacatccaggacgccatgcag
ggccagatccgaggcctggtgcttcccaagcctgagagtcccaggactctgaccaacatc
gaggaatctgatgtgtaccggatgctgcagagggaccaggacgaccccccggagcctcgg
cagtccggatcatttaaagccctgcaggagttcattgacagcgatggcactcgacccatt
gtgactcgcacagtgaaagcccccacgactaaacccgctgcaccttcaggaaacctgcag
aagctgcctgtctgcgacaagtgtgggaatggcattgtcgggacagtggttaaagccaga
gacaagtgccgccaccctggctgctttgtgtgtgctgactgtgacgtcaacctgaaacag
aaaggctatttcttcgttgagagccagctgtactgtgagattcacgctcgagccagaatg
agaccaccagagggccacgatctggtcaccacatttccctcttcctag
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