Xiphophorus hellerii (green swordtail): 116719523
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Entry
116719523 CDS
T07363
Symbol
brat1
Name
(RefSeq) BRCA1-associated ATM activator 1 isoform X1
KO
K23112
BRCA1-associated ATM activator 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116719523 (brat1)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116719523 (brat1)
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Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT
Motif
Other DBs
NCBI-GeneID:
116719523
NCBI-ProteinID:
XP_032417953
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Position
5:33345203..33363401
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AA seq
892 aa
AA seq
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MDSQCVSILPRVCGVLLESGSSLPDDTSLEKLLDWFTTIAQTGASLLEACPCLVDFVSKV
AFNHASGSSILSFTLKLTGLISASEDGFKVLKECSVLKLVFNPHHWQEAGLWEDPCLRIG
WIQGLKMILQHSEALSFFAQEDLIEPLLQLQTDSSLFVASAANQTLAQVLLLCQSLSSVG
HNCSKNRYLEHNSVSMETTQNYSGIITRVSEYLNKSVVLKEISQLPGCQQILRLLAMLLV
QVGPPLRDTLLLAVMNSLEELVTTSCSQLTVPLMDVILAANSGLRDNFVPKQRLIRLLWV
MLNMKKPAIVMQAAAAVLHSHHSDPAFSAHSARVLLLPLDIVTGVSLLDENSTGEQMTLV
CFYMCNKCLLTSFKSMLSNPAEEELRILITEQLKRKSCISMICVCLSNIPQITLMASDHL
PCPQRLIVTAVLMLLRLCCVDSSSSSAGCVEVVRFITGNSKVQKCALEALLVLSKSPGVK
MVLVDVFKVLTEYLNSPSSDPSVLQKSYQAVIKWVGVCPDLSCITDQLREGFIQTVRKRA
CDTRWEARDSTVEFLGHLGGAPSCRSFTEQETEPSDVLLGGCSFTVPLLKEALQDPESYV
RASSISALAQTLTPSWQEGAVLTQEQEDIVTQLQEVLFQDSEGFPRRAAVKYFIAWLSAC
SSPSSCWLLMQSVPTVLSQGVNDLDWEVKLHTLELAELLLDQAFPDPSPSHPYAVMSDQA
HRLHIAGQQSDLLSSLKDLVDRGVVSALLCGVVDCDRPVALKACQLLLKLRGVVCPVMGN
AADTTVFCQLAEGSVMQQVRKIQAMGKDTYVVSEACSEADKEGICASVDPERVGVCEVLR
LLDLDEKLSILTQSSDHIYNSPLSLLQDILTAAAASSQPGRDPHQELVMDCY
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggatagccagtgtgtttccatcctgccccgcgtctgtggagttctgttggagtcagga
agctctctccccgatgacaccagtctggagaaactactggactggtttacaaccatcgcg
cagactggggcatcactgttggaggcgtgtccatgtctggttgatttcgtctccaaggtg
gcctttaaccacgcctcaggctccagcatcctttctttcactctgaagctcactggcttg
atcagtgcttctgaagatggttttaaagttctgaaggagtgctctgtattgaaactggtc
tttaatcctcatcactggcaagaggcaggactttgggaggatccgtgtttgcggattggc
tggatccagggtctaaagatgattctgcagcactcagaagctctcagtttttttgcgcaa
gaagatcttattgaaccactccttcaacttcagacagactcaagcctttttgttgcttca
gctgccaatcagacactcgctcaggtcctgcttctctgtcagtctctatcttctgtgggt
cataattgttcaaaaaatagatacttagaacacaacagtgtgagtatggaaaccacccag
aattacagtggcatcatcacaagggtctctgaatatctgaacaagtcagtggttctgaag
gaaatttcacagcttcctggatgccagcagatcctcaggctactggctatgctcctggtc
caggttgggcctcctttgagggacacactgctgctcgctgtcatgaactctctggaggaa
ctggtgacaacaagctgcagtcagctcacagttcctctcatggatgtcatcctggctgca
aacagtggtctcagggacaattttgtcccaaagcagcgactcatccgacttttgtgggtc
atgttgaacatgaagaagcctgccattgttatgcaggctgcagctgctgtgctacacagc
caccatagtgaccccgccttctctgcccactctgctcgagtcctgctgctacccctggac
atcgttaccggtgtctccttactggatgagaactccacaggtgaacaaatgactttggtg
tgtttttacatgtgtaataaatgtttattaacttcctttaagagcatgttgtcgaatcct
gcagaagaagagcttcgaattttaataactgagcagcttaagaggaaaagctgcatctcc
atgatttgtgtatgtctatcaaacatacctcagatcacactaatggcttcggaccacctc
ccctgtcctcagaggctaattgttactgcagttttgatgttactgaggctgtgctgtgtg
gactcctcatcttcatctgctggctgtgttgaagttgtcagattcattacaggaaacagc
aaagttcaaaaatgtgccctggaggctctgttagtgctcagcaagagtccaggagtgaag
atggttctggttgacgtcttcaaagttctaactgaatatttaaatagtccttcatctgac
ccatctgtgctccagaagtcctaccaggctgtgataaagtgggtgggtgtttgtccagat
ctgtcctgcatcacagaccagctcagagaaggtttcatccaaacggtgagaaagcgtgct
tgtgacacgcgctgggaggccagagactccacggtggagtttctgggtcacttggggggg
gcgccctcatgccggtcgttcactgaacaggagacggaaccatcagatgttctcctgggt
ggctgcagctttacggttcctctcctcaaggaggcgctgcaggatccagagagctatgtg
agagccagctccatctctgctctggcgcagacactgacacccagctggcaggagggggca
gtattaacacaggagcaggaggacatagtaacccagctgcaggaagttctcttccaggac
tcggagggatttcccaggagagctgctgtgaagtacttcattgcctggctctccgcttgt
tcctcgccttcctcctgctggctcctcatgcagtctgtgccgaccgtcctctctcagggt
gtcaacgatctggactgggaggtcaaacttcacaccctggagttggcagagctgctgctg
gaccaagcctttccggatccttctccatctcatccctatgctgtgatgtctgaccaagcc
cacagacttcacattgcaggtcagcagtcagacctgctcagcagcttgaaggatttggtc
gatcggggagtggtctcagctctgttgtgtggtgtggttgactgtgacagacctgttgct
ctgaaggcctgccagctgctgctaaagctccgaggcgttgtttgtcctgtgatgggtaac
gcagcagacaccacagttttctgtcaactggctgaaggcagtgtgatgcagcaggtcaga
aagatccaggcaatggggaaggacacctatgttgtttctgaagcttgcagtgaggcagac
aaggaaggcatatgtgcaagtgttgacccagagcgtgttggtgtgtgtgaggtgttgagg
cttctggatttagatgagaagctgagcatcttgacccaaagcagcgaccacatctacaat
tctcccctctctctgctccaggacatcctgacagccgctgctgctagttctcagcctggc
cgggacccgcaccaggagctcgtaatggactgttactaa
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