Xiphophorus hellerii (green swordtail): 116719558
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Entry
116719558 CDS
T07363
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116719558
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116719558
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116719558
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116719558
NCBI-ProteinID:
XP_032417990
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Position
5:complement(20601810..20610997)
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AA seq
653 aa
AA seq
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MRGGSSYGDRDRDRDRGRDRPRFGGGMGGRSGPPPMKFGNPGERLRKKRWNLDELPKFEK
NFYTEHVEVQRMGQYDVEEFRRKKEITIRGSGCPNPVTAFHHAQFPQYVMDVLVQQNFKE
PTAIQAQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT
RELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRE
YIQINIGALELSANHNILQIVDVCMETEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDD
LTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINY
DYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVD
SSRGGGGGGRMRYRGGNSNNPNLMYQDECDRRMRSGGGGKDSRGGFNRDGRNNRDDDRSS
SSSYRDRNRDHRNNYNAGSDQYQNYNNNNNGGGYNTRGGAPTGGGQEQPNQPQGQFGQGP
PPPPPPSGAPQPLMAQQFPPPPQPPLMGFMGQPPFPPFPAAPPPPPGPQPPRK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagagggggctcctcgtacggagacagggacagagacagagatcgtggacgagacaga
ccacggtttggagggggcatgggtggccgcagcggaccgccgcctatgaagtttggaaat
cctggtgagcgtctccgcaaaaagaggtggaacttagatgagttgccaaaatttgaaaag
aacttctacactgaacacgttgaagtccaacgcatgggtcagtatgatgtggaggagttt
cgcaggaagaaggagatcaccatcagaggctctggctgtccaaacccagtaactgctttt
catcatgctcagtttcctcagtatgtgatggatgtcctggtgcagcagaacttcaaggag
cccacagccatccaagcccagggtttccctgtggccttgagcggcaaggacatggtggga
atagcacagactggctctgggaagacgctggcttacctccttcctgctatcgtacatatc
aaccaccagccctacctggagagaggggatggccccatatgtctggtccttgcacccacc
agagagctggctcagcaggtccagcaggttgcctacgactatggcaagtcctcccgcatc
aagagcacctgcgtgtacggcggcgcacccaaaggcccacagattcgagaccttgagaga
ggcgttgagatctgcatcgccacgccgggtcgcctcattgacttcctggaggcagggaag
accaacctgcgccgctgcacttatttagtgctggacgaggccgaccgcatgttggatatg
ggctttgagccgcagattcgcaagattgttgaacaaatcagacctgacagacagaccctg
atgtggagtgcaacgtggccaaaggaggttcggcagcttgccgaggacttcttaagggaa
tacatccagattaacattggcgctctggagctcagtgccaaccataacattctgcagatc
gtcgatgtctgcatggagaccgaaaaagacaacaagcttattcagctgatggaggagata
atggctgagaaggagaacaaaaccatcatctttgtggagaccaaaaaacgatgcgatgat
ctcacccggaggatgaggcgcgatggatggccagccatgtgtatccatggagacaagagc
cagccagaaagagactgggttctcactgaattcaggagcggcaaggcccctatcctgatc
gcgacagatgttgcctctcggggtctggatgtggaagacgtaaagttcgtcatcaactat
gactatcccagctcctctgaggattatgtccatcgtattgggcgcacggcccgcagtacc
aataagggcaccgcctacaccttcttcacccctggaaacctgcgacaggccagagacctg
gtccgggtcctggaggaagcccggcaggctataaacccaaaactgctccagctggtggac
tccagccgcggaggtggaggcggtggcaggatgcgttaccgtggcggcaactccaacaac
cctaacctaatgtatcaagacgagtgcgatcggcgcatgcgctccggcggaggcggcaaa
gacagccgcgggggcttcaaccgcgacggccgcaacaaccgcgacgacgaccgctcctcg
tcgtcgtcctacagagacagaaaccgagatcacaggaacaactacaacgccggctcggat
cagtaccagaactacaacaacaacaacaacggcggaggctacaacacccgcggcggagcc
ccgaccggcggcggtcaggagcaacccaaccagccgcagggccagttcggccagggccct
cctccaccccctccgccgtcaggcgccccgcagccgttgatggcacagcagtttcccccg
ccgccgcagcccccacttatgggcttcatgggtcagccgcctttccctcctttccccgct
gccccccctccaccgccaggcccacaaccaccccgtaaatag
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