Xiphophorus hellerii (green swordtail): 116719562
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Entry
116719562 CDS
T07363
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2
KO
K13210
far upstream element-binding protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116719562 (khsrp)
03041 Spliceosome [BR:
xhe03041
]
116719562 (khsrp)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116719562 (khsrp)
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116719562 (khsrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
116719562
NCBI-ProteinID:
XP_032417996
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All DBs
Position
5:22553678..22564301
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AA seq
647 aa
AA seq
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MSDYGGVSSNGVGAGVKKDAFADAVQRARQIAAKIGGETVPQVTNNGGAESYPFSAQKRS
LEEGDEPDAKKLASQSERDSAMSIGAQLAALSQQSVRSSTITEEYKVPDSMVGLIIGRGG
EQINKIQHDSGCKVQIAHDSVGLPERSISLTGSPEAVQRAKAFLEDIVSRGHDSSNGQSG
SMQEIIIPAGKAGLIIGKGGETIKQLQERAGVKMILVQDGSQPPNIDKPLRIIGDPYKVQ
QAKEMVNEILRERDHAGFGDRNEYGSRMGGGGIDIAVPRQSVGVVIGRSGEMIKKIQSDA
GVKIQFKPDDGTGPDKIAHIMGPPDQCQHAASIITELLQSIRARDEGGQGGPPGPGMSSG
GRSRGGGQGNWGPSGGEVTFSIPAHKCGLVIGRGGENIKSINQQTGAFVEISRQMPPNGD
PNYKLFIIRGSPQEIDHAKQLIEEKIEGPLCPVGGGPGSGGPGGPMGPYNPNPYNAGPPG
GAPHGAPGGPQYCSQGWGNPYQQWQAPNSHDPNKAAADPNAAWAAYYAQYYGQQPGAAMA
PQAPGAPAGAGDQGQGAQTCGGQPDYTKAWEEYYKKMGMTQPGGGAAATPGSAPAAAAAA
PGGADAGGQQDYSAAWAEYYRQQAAYYGQAGQAPGQAGGPQPGQQPQ
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattacggcggagtctcctctaacggtgttggcgctggggtgaaaaaagacgcc
tttgcagacgccgttcaacgagccagacagatcgcagctaaaatcggtggagagactgtg
ccccaagtgacaaacaacggaggagctgaaagttatccgttctctgcacagaaacgatcc
cttgaagaaggagatgagcccgatgctaagaagttagcatcacagagtgaaagagattca
gcaatgtctattggagctcagttagctgctctgtcccaacaaagtgtcaggtcctccact
attacagaagagtacaaggttcctgacagcatggttggcctcatcattggacggggaggg
gaacagatcaacaaaatacagcacgactctggctgcaaggtccagattgcgcatgacagc
gtcggtcttccagagagaagcatttccctgactggatcaccagaggcagtacagagggcc
aaggcttttctagaggacattgtgtccagaggtcatgattcaagtaacggtcagtccggc
tccatgcaagagatcatcattcctgcaggaaaggccggcctaattattggtaaaggagga
gagacgatcaaacagctccaggagcgagctggagttaaaatgattcttgttcaggacgga
tcacagccaccaaacatagacaaacccttgcgcatcatcggagacccttacaaagtgcag
caagcaaaggagatggtgaatgagattctacgagaacgggatcacgctgggtttggagat
aggaatgaatacggctcaaggatgggagggggcggcattgatatagctgtaccgcgacag
tctgtaggagttgtgatcggtcgcagtggggagatgataaaaaaaatccagagcgatgct
ggtgtgaagatccagtttaaaccagatgacggtacaggccctgataagattgcacacatc
atgggccctccggaccagtgtcagcacgctgcttccattatcactgagctgctgcagagc
atccgtgcccgagatgaaggcgggcaggggggccctccaggtcccggtatgtcgtcggga
ggccgaagtcgtggtggaggtcagggaaactggggtccttcaggaggagaggtgaccttc
tctattcccgcgcacaaatgtgggctcgtcattggcagaggaggagagaacatcaagtcc
atcaaccagcaaaccggggcgtttgtggagatttcccgtcaaatgccgccaaatggcgac
ccaaactacaaactgtttatcatcagaggctcccctcaggagattgaccacgccaagcag
ctcatagaagaaaagattgagggtcctttgtgtccagtaggaggtggtcccggttctgga
ggtccaggtgggccgatgggcccctataacccaaatccctataatgcagggcctcctggt
ggagcgccgcatggagctcctgggggtccccagtattgttctcaaggttggggaaatcct
taccaacagtggcaagctccaaattcacatgaccccaacaaagcagctgcagatccaaac
gcagcatgggcagcatactatgctcaatattatgggcagcagccaggggccgccatggcc
ccccaggcaccaggtgcccctgcaggagcaggggaccagggccaaggagctcagacttgt
gggggccagcctgactatacgaaagcctgggaggaatattataagaagatgggcatgact
caaccaggtggaggagcagcagccactccaggctcagcaccagccgctgcagctgcagca
ccaggtggcgctgacgctggtggacagcaggactacagtgcagcctgggctgagtactac
agacagcaggctgcctactatggacaggcagggcaagctcccggacaggcaggtggtcca
cagccgggacagcagccccagtaa
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