Xiphophorus hellerii (green swordtail): 116719580
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Entry
116719580 CDS
T07363
Name
(RefSeq) atherin-like
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116719580
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
116719580
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
116719580
NCBI-ProteinID:
XP_032418023
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Position
5:23468229..23480715
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AA seq
642 aa
AA seq
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MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKRSEFGGGADAPRERTKPDRPNNNNGDSAHSFTDPEEGET
EPDPRAETSVSSRNKKLQPASSPGSGNACLSCGATTSCAVGSGCEEEKASAPRDKGLGQQ
GAGGCLPLGAGTGDRSEDVPSGGGKKSGLSGADTRSQTYSGSDSQAQTQRQTESGQPKLR
LGGGTTKAAHRHANSELRELAALSEKPLRAPGGGGGGSAAATRGHVKPLGLKEILGYLSS
QERLSEEKLTRGKVKVVMEREVERGRLRRTRCGNITLPLRGMEPDEPEPSDSSADRLARS
ALQDKRAAKKSPPPARLESEPMETGEEEEEGQGGEEEEKDNDDDPRSSDEDGGLSPVAMT
TEAGLAEKMGEDAIFQRELQEESPQRQRKDGKGKCELDFPPESRSPPTDGASWSECNGAC
SEEGAFSSDHLGYTHHNEINLTASSFRNLEYKTEIGASSCMLTPTASPRDSSLPEERGAS
DSSGGHMKFGSTRVSPVDWTVSDVVSYFTAVGFPEQAAAFRTQEIDGKSLLLMQRNDVLT
GLSIKLGPALKIYERHVKVLQKTHFEENDCYEDAKDTLRLLC
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaacaagtaccgagagtggatcctggaaactatcgactctctgcgttcg
aggaaagcccgtccggatctagaaaggatttgtcgaatggtccggaggcgacacgggtca
gacccagaccgaaccaggacggagctggaaaaactcatccaggagcagacggtgctcaaa
gttagctacaagggatcgatatcgtaccgaaacgcggccaaggtgcagaggaaaagcaga
aaacggagcgagttcggcggcggcgcggatgcaccgagggagcggaccaaacccgatcgt
ccgaacaacaacaacggcgacagcgcgcacagcttcaccgacccggaggagggcgagacg
gagccggatccccgcgccgaaacatcagtcagcagtcgaaacaaaaagctccagcctgcc
tccagcccgggtagcggaaacgcgtgcctcagttgtggcgcaacaacgagctgcgctgtc
gggagcggctgtgaagaggagaaagcaagtgcaccgagagacaagggattaggacagcag
ggagcggggggctgcctgccgctcggcgcgggcaccggagaccggagtgaggatgttcca
tccggcggaggaaagaagtccggtctgtctggagctgacacccgaagccaaacttactcc
gggagcgacagccaagcccagacacagaggcagaccgagtctggccagcccaaacttcga
ctcggaggaggaaccaccaaagcagcgcaccgccacgccaactccgagctgcgcgaactg
gcagctctgtccgagaagcccctccgagcgccaggaggtggaggtgggggttccgccgcc
gcgacccgaggccacgtgaagccgctgggcttgaaggagatcctgggctacctgagcagc
caggagcggctgtcggaggagaagctgacccgaggcaaagtcaaagtggtgatggagaga
gaggtggagaggggcaggctgcgcaggacgcgctgcgggaacatcactcttcctctacgg
gggatggagccggacgagcccgagccgagtgattcgtccgccgacagacttgcgagaagc
gcactgcaggacaaacgcgcagcgaaaaagtccccacctccagcccgtctggagagcgag
cccatggaaaccggcgaggaggaagaggagggccagggaggagaggaggaagagaaagac
aatgatgatgatcccaggagttctgatgaggatggaggactttccccggtagccatgaca
accgaggctggacttgctgagaaaatgggagaagatgcgatctttcagagggagctgcag
gaggagagccctcagcggcagaggaaggatggaaaagggaagtgtgagcttgattttcct
ccagagtcccggtctccacctaccgacggagcctcgtggtctgagtgtaacggtgcctgc
tccgaggagggagctttctcctcagaccacctgggctacacacaccacaatgaaataaac
ctcaccgcctcgagctttcgcaacttagagtataaaacagagatcggcgcttcgtcctgc
atgctcactcctaccgcatccccgagggactccagcctccccgaagaacgaggcgctagc
gacagcagtggagggcacatgaagtttggcagcaccagagtaagcccggtggactggacc
gtgtctgacgtggtcagttatttcacagcggtgggtttccccgagcaggcggcagccttc
aggacacaggaaatcgacgggaagtctctcctcctcatgcagcgcaacgacgttttgacc
ggcctgtcgatcaaactcggacccgccctcaagatctacgagcgtcacgtcaaggttctg
cagaaaacacactttgaggagaatgactgctacgaagatgcaaaagatacactcagactg
ttatgttaa
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