KEGG   Xiphophorus hellerii (green swordtail): 116719647
Entry
116719647         CDS       T07363                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xhe03041]
    116719647
Spliceosome [BR:xhe03041]
 Complex B
  Other components
   Complex B specific factors
    116719647
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_VPS8 NBCH_WD40 Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_Aladin Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_RSE1_1st Nucleoporin_N Beta-prop_IP5PC_F TFIIIC_delta WD40_like Beta-prop_WDR11_2nd Cytochrom_D1 VPS8_N
Other DBs
NCBI-GeneID: 116719647
NCBI-ProteinID: XP_032418107
LinkDB
Position
5:complement(15736091..15748806)
AA seq 511 aa
MAVELEPTDVIRLIMQYLKENNLYRTLMTLQEETTVSLNTVQSIESFIEDINRGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMILLNQTEPERYAHLEKL
LTCPYFDPREAYPKGRSKEKQRRAIAEALAREVSVVPPSRLIGLLEQVGYMKRQINPGYL
SPEMIIDTSTNKEQHAEKERFPSQLYRHIKFGRRSHVECARFSPNGRYLITGSVDGFIVF
WNFNSGKICKDLKYQAQESFMMMDDAVLSMCFSQDVDLLATGAQNGKIKVWKIQSGLCVR
RFENAHNKGVTCLSFSKDSDHILSASLDQTIRIHELRSGKTLRELKGHSSFVNDACFAQD
GFHIISASADGTVKIWNTNSCECIHTFKSQSVTSEVPVNNVIPLPQKPEEFVVCNHSSTV
VIMNMHGQTVKTFCSEQPETADFVCCTVSPHGEWIYCVGEDSVLYCFNYTTGRLEKTLTV
HDKDVIGIAHHPHENLIATFSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctgtggagctggagcccactgatgtgatccgtctgatcatgcagtacctcaaggag
aataacctctaccgcacgctgatgaccttacaggaagaaaccacagtttctctcaacaca
gtgcaaagcatcgagagctttatagaggatataaacaggggccactgggactctgttctg
ctggccattgagtctctcaagttgcctgacaacacactgattgacctctatgaacaggtt
gtaatggagctcattgaaatgagggaggtgggtgcagcccgttcgctcctcagacaaact
gacccaatgatcctgctgaatcagaccgagccagagaggtacgcccatctggagaaactg
ctgacgtgtccttactttgaccctcgagaggcgtacccaaagggcagaagtaaggagaag
cagcgcagagccatagctgaggctttagcaagagaggtcagtgtggtgcctccttctcga
ctcattggactcctggaacaagtcggctatatgaagcgacagataaatccaggttatctt
tcccctgaaatgataatcgacacatcgacaaacaaggagcagcatgcggagaaagaaagg
tttccatctcagctgtaccgccacataaagtttggacgacgttcacacgtggaatgcgcc
cggttctctcctaatggaaggtatttaatcaccggatcagtggatgggtttattgtgttc
tggaacttcaacagtggaaaaatttgtaaggatctcaagtatcaggcccaagaaagcttc
atgatgatggacgatgctgtgctgagtatgtgcttcagtcaagatgtagatctactcgcc
acaggagctcagaatggcaaaattaaggtgtggaagatccaaagtggcctgtgtgtgcga
aggttcgagaatgctcacaacaaaggtgtgacttgtctgagcttttcaaaggacagcgac
cacatcctcagtgcctcacttgaccaaaccataagaatccatgagctgaggtcaggcaag
acgctgagggagttaaaaggacattcatcgtttgtaaacgatgcgtgcttcgctcaggat
ggttttcacatcatcagtgcctcagccgatggcactgttaagatttggaacacaaactcc
tgcgaatgcattcacacgttcaaatcccagtcagtgacgtcagaagtcccagtcaacaat
gtgattcctcttccccaaaagcctgaggagtttgtggtgtgtaaccactccagcacagtg
gtcatcatgaacatgcacggccagacagtgaagactttctgttcagagcagccagagaca
gcagactttgtgtgctgcaccgtgtcaccccacggggagtggatctactgtgtgggggag
gacagtgtgctgtactgttttaactacacgacagggaggctggagaaaacgctgactgtt
cacgacaaagatgtaattggcatcgctcaccacccacatgagaacctgattgccacattc
agcgaggatggcctgttaaggctgtggaaaccttaa

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