Xiphophorus hellerii (green swordtail): 116719658
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Entry
116719658 CDS
T07363
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-B-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
xhe04517
IgSF CAM signaling
xhe04530
Tight junction
xhe04810
Regulation of actin cytoskeleton
xhe05100
Bacterial invasion of epithelial cells
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116719658
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116719658
09144 Cellular community - eukaryotes
04530 Tight junction
116719658
09142 Cell motility
04810 Regulation of actin cytoskeleton
116719658
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116719658
05100 Bacterial invasion of epithelial cells
116719658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116719658
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116719658
Membrane trafficking [BR:
xhe04131
]
Others
Actin-binding proteins
Arp2/3 complex
116719658
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
116719658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
RMC1_N
PEP5_VPS11_N
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Tricorn_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
SH3_3
Motif
Other DBs
NCBI-GeneID:
116719658
NCBI-ProteinID:
XP_032418129
LinkDB
All DBs
Position
5:32596598..32603441
Genome browser
AA seq
380 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGTKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGSWKPTLVILRINRAARCVKWSPKENKFAVGSSSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEVLFESGGSGGAAPSSSGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTGTVSSLSSETLPLLCVTFITENSLVAAGHDCYPMLYVYDGANASLTFGGKLDVPKQ
AASKDISARERFKNLDRRASETQSTDKDLNTLHKNSISQISVLEGGRNQCTKFCTTGMDG
GMGIWDVKSLESAMKNLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccatagcttccttctggaaccaattagctgccatgcgtggaacaaagatcgg
acccagattgccctgtgccccaataaccatgaagtccacatctacaagaaagatggaacc
aagtggaccaaaatccacgagctgaaggagcacaatggacaggtaacaggtattgactgg
gctccagacagtaaccgcatcgtcacttgtggtgctgatcgtaacgcttatgtgtggacc
ctgaaggagggatcatggaagcccaccttggtcatcttgaggatcaaccgggccgctcgc
tgtgtgaagtggtcaccaaaggagaacaagtttgccgttggcagcagttcgaggctcatt
tcaatctgctactttgagcaggaaaatgactggtgggtgtgcaagcacatcaagaagccg
atccgttctactattctgagtctggactggcatcctaataacgtgctgctggctgctgga
tcctgtgatttcaaatgcagggtgttctcagcctacataaaggaggtggaggagaagcct
ggccccactccttggggcagcaagatgccatttggggaggtgctgttcgagtctggaggt
tctggaggtgctgctccgtcatcgagtggaggtggcggctgggtgcacagcgtgtgcttt
tctcattctggcaaccgtttggcctggacgtcccacgactccacagtgtcagtagctgag
ggaggaaagacgggcacggtgagcagcctgagctcggaaactcttcctctcctgtgtgtt
accttcatcactgagaacagcttagttgctgctggtcatgactgttacccgatgctgtat
gtatatgatggtgcaaatgccagcttgacatttggtggcaagttggatgttcccaagcag
gcagcttcgaaggacatcagtgccagggaacgctttaagaacctggaccgtcgagcctct
gagactcagagcactgacaaggacctgaacacgctccacaagaacagcatcagccaaatc
tcagtgctggagggaggaagaaaccagtgcaccaaattctgtaccactggcatggatgga
ggaatgggcatctgggatgtgaagagcctggagtctgctatgaagaatttgaagatcgtg
tga
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