Xiphophorus hellerii (green swordtail): 116719729
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Entry
116719729 CDS
T07363
Symbol
colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00310
Lysine degradation
xhe00514
Other types of O-glycan biosynthesis
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116719729 (colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116719729 (colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhe01003
]
116719729 (colgalt1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116719729 (colgalt1)
Glycosyltransferases [BR:
xhe01003
]
O-Glycan biosynthesis
O-linked Gal type
116719729 (colgalt1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
116719729
NCBI-ProteinID:
XP_032418264
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Position
5:complement(23712356..23733312)
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AA seq
609 aa
AA seq
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MLRVTSLLLALLFVLLPGSGWSYFPEERWSPESPLLAPRVVIALVCRNSAHSLPLFLGAV
ERLNYPKDRLALWVATDHNIDNTTAILRDWLIVVQNYYHYVEWRPDDENSAFEDEVGPKH
WNNLRYEHVMKLRQAALDTAREIWADYLLMADCDNLLTDRDVLWKLMRENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRRRERRGCFAVPMVHSTYLVDLRKEASSQLAFYP
PHPEYSWALDDVIIFAYSARMADVQMYVCNRDTYGYFPVPMRSHATMQDEMESFLHTHLE
IMVNNPPLEPSSFLSLPPKHPNKMGFDEVFMINLVRRADRRERMLRTLYEQEISCKVVAA
VDGKALNTSDIDSMGIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIVARGLQTTLVL
EDDLRFEVFFKRRLQALLQEVTTHKLDWDLIYIGRKRMQVDHPEKSVPNVHNLVEADYSY
WTLGYMLSLQGAQKLLMAEPLSKMLPVDEFLPVMFDKHPISEYMEPFERRDLRAFSAEPL
LVYPTHYTGEAGYVSDTETSVVWDNETVKTDWDRAKSRKTQEQGELSFKAQNSDVLQSEL
ENVSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggtcacctcactgctgcttgccctgctgttcgttctgttgccgggctcgggc
tggtcttatttcccggaggagcgctggagccccgagtcgccgctcctggctcccagggtc
gtcatcgcgctggtctgccgcaactcggcccactctctgccgctgttcctcggagccgtc
gagcggctgaactacccgaaggaccgcctagcgctctgggtggcgacagatcacaacata
gacaacaccacagcgatcctaagagactggctcatcgtggtgcagaattactaccattat
gtggagtggcgacctgatgacgaaaacagtgcctttgaggacgaagtggggccaaaacac
tggaacaatctccgatatgaacacgtgatgaaacttcggcaggcagcgctggacaccgcc
cgcgagatctgggccgactatctcctgatggccgactgtgacaacctgctcactgacaga
gatgtgttgtggaagctgatgagggaaaacaaaaccatcgtcgcccccatgctggagtcc
agagccgcttattccaacttctggtgcgggatgacttcacagggttattacaagcgcacc
ccggcctacatgcccattcgccgccgggagcgccggggctgtttcgctgtgccgatggtc
cactccacctacctggtggatctgaggaaagaagcctccagtcagctggctttctacccg
ccacaccccgagtacagctgggcgctggacgacgtcattatctttgcttactctgctcgc
atggcagacgtgcagatgtacgtgtgcaacagagacacttacgggtatttcccggtgccc
atgcgttcccacgctaccatgcaggatgaaatggaaagctttttgcacactcaccttgag
atcatggtgaataatcctccattggagccctccagcttcctgtctcttcctcccaagcat
ccaaacaagatgggctttgatgaggtcttcatgataaatctggttcgtcgagccgaccgc
cgcgagcgaatgctgagaactttgtacgagcaggagatcagctgtaaggtcgttgctgct
gtggatggcaaagctctgaatacgtctgacatagattccatggggattaaaatgctcccg
ggatacaaagacccttatcacggtcggcccctcaccaagggcgagctgggttgtttcctc
tctcattacaacatctggaaggagatcgtggcgcgcggcctccagacgaccctggtgctg
gaggacgacctccgctttgaggtgttcttcaaacgccggctccaggcactgctgcaggaa
gtgaccacgcacaaactggactgggatcttatatacatcggacggaagcggatgcaggtg
gaccacccggagaagtccgtcccaaacgtccacaacctggtggaggccgactactcctac
tggacgctcggctacatgttgtctctgcagggagcccagaagctcctcatggccgagccc
ctgagcaagatgctccccgtcgacgaattcctcccagtcatgttcgacaagcaccccatt
tcggagtacatggaacccttcgagcggcgggacctgcgggcgttttccgccgagccgctg
ctggtgtacccgacccactacacgggggaggcgggctacgtcagcgacacggagacgtcc
gtggtgtgggacaacgagaccgtcaagacggactgggaccgggccaagtcgaggaagacg
caggagcagggcgagctgagcttcaaggcgcagaactcggacgtgctgcagtccgagctg
gagaacgtgagcgcacgggacgagctgtga
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