Xiphophorus hellerii (green swordtail): 116719748
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Entry
116719748 CDS
T07363
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
xhe04137
Mitophagy - animal
xhe04144
Endocytosis
xhe04340
Hedgehog signaling pathway
xhe04350
TGF-beta signaling pathway
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116719748
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116719748
04350 TGF-beta signaling pathway
116719748
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116719748
04137 Mitophagy - animal
116719748
09144 Cellular community - eukaryotes
04520 Adherens junction
116719748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116719748
04121 Ubiquitin system [BR:
xhe04121
]
116719748
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116719748
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116719748
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116719748
Autophagy
Mitophagy
Other mitophagy associated proteins
116719748
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
HECT type E3
116719748
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116719748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
116719748
NCBI-ProteinID:
XP_032418287
LinkDB
All DBs
Position
5:complement(26340470..26401240)
Genome browser
AA seq
776 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNRL
GPNDNDTVRGQIVVSLQSRDRIGSGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAVASGPPGEQRVQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNSPSSNGSRVAPDSQNTNL
SHPPQLKDQGGPGVPPQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIP
VTEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKI
DIADWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagtaaggagaaatggcccagtaaagctgcggttgacagtcctctgt
gcaaaaaacctggcaaagaaagacttctttcggttgccggatccttttgctaaagtggta
gtggacggttctggacaatgccactcaacagatactgtgagaaatactcttgatccaaag
tggaatcaacattatgatctctacatcggaaagtcggactccattacgatcagtgtctgg
aaccacaagaagatccacaaaaagcagggcgcgggattcctcggctgcgtccggctcctg
tccaacgccatcaacagactcaaagacacgggctatcagagactggacctgaataggctg
ggccccaacgataacgacaccgtaagaggacagatagtagtgagtcttcagtccagagat
cgcatcggatccgggggaccagtggtagactgcagccgcctgtttgacaacgatttgccc
gacggctgggaagagaggaggacagcatcggggaggatacagtacctgaaccacatcacc
cgcaccacgcaatgggagagacccaccaggccggcgtcggagtactccagcccatccggg
cgtccgctgagctgcgtggtagacgaaaacacgccggtgatgactcctgttaacggggcc
gtggccagcggacctccgggcgaacagcgcgtccaggagcgacgggttcgatcgcagcgg
catcggaactacatgagtcgaacacacctgcatacgccgcccgatctgcctgagggctac
gaacaaagaaccacccagcagggccaggtgtatttcctccacacacagaccggagtcagc
acctggcacgacccccgagtacccagggacttaagcaatgtgaactgtgaggagctggga
ccactgcctccaggctgggagatcaggaacaccgccaccggccgcgtctactttgttgac
cacaacaatcgaacaacacagttcacagatccacgactgtctgccaacctgcatctagtg
ctcaacagcccaagttcaaatggttcccgcgtggccccggacagccaaaacactaacctc
agtcatccaccacagctaaaggaccagggtggtcccggagtccctccgcaggctctgtct
cccgctcagctaccagaagaggcggagtgtctgacggtgcccaagtacaagagagacctg
gtgcagaagctgaagattctccggcaggagctctcgcagcagcagccgcaagccggccac
tgccgcatcgaggtcagccgggaggagatcttcgaggagtcgtatcgacaagtgatgaag
atgcgtccgaaggatctctggaaaagactgatgataaaattcagaggagaagagggactg
gactatggaggagttgctcgggaatggttgtacctgctgtcgcacgagatgttgaaccca
tattacggcttgttccagtactccagagacgacatctacactctacagattaacccagac
tctgctgtcaacccagaacacctgtcgtacttccactttgtgggccgcatcatgggcatg
gcggtgtttcacggccactacatcgacggaggcttcacgttgccgttttacaaacagctg
cttgggaaaccaatcacgctggacgacatggagtctgtcgaccccgacctccacaacagc
ctcgtttggatcttggacaatgacatcacaggggtcctggaccacaccttctgcgtggag
cacaacgcttacggagaaatcatcccacacgagctgaagcccaacgggaagagcatcccg
gtgacggaggacaccaagaaggagtatgtcaggctctacgtgaactggcgtttcctccat
ggcatcgaggctcagtttctggctctccagaaaggcttcaacgaggtcatcccgcagcac
ctgctcaaggccttcgacgagaaggaattagagctgatcgtgtgcggcctggggaagatc
gacatcgccgactggaagtccaacactcggctgaagcactgcaccccagacagcaacatc
gtcaagtggttctggaaagccgtggagtcgttcgacgaggagaggagggcccggctgctg
cagttcgttactggctcgtccagagtcccactgcagggcttcaaggctttacagggtgca
gcaggacccagactcttcaccattcatcagattgatgccaacgccaacaacctgcccaaa
gcgcacacctgcttcaaccggatcgacattcctccctacgagagctacgacaaactgtac
gacaagctactgacggcgatcgaggagacgtgcggcttcgcggtggagtga
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