Xiphophorus hellerii (green swordtail): 116719760
Help
Entry
116719760 CDS
T07363
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116719760 (otx1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116719760 (otx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Arteri_GP4
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
116719760
NCBI-ProteinID:
XP_032418311
LinkDB
All DBs
Position
5:8079413..8089437
Genome browser
AA seq
343 aa
AA seq
DB search
MMSYLKQAPYGMSGLGLSGAAMDLLHPSVGYPANPRKQRRERTTFTRTQLDILESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSNNSAKVKPMKKKSSPTRESTG
SESSGQFTPPAVSSSSSSTSTSSSSSSSVSSGLGGPALISTSTSVTAPVSSIWSPAPISP
APAPANLPDPVAPTSASCMQRSATSSSNGGAASYPVSYSQTAAAYSQGYPASATGSYFSG
VECGSYLAPMHSHHHPHQLSPMTGSSMTGHPHHHIGQTTGHHHHHHHHPPHHHQTYSAPG
LAFNSTDCLDYKEQTAASAWKLNFNATDCLDYKDQASWRFQVL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaggccccgtacggcatgagcgggctgggcctgagcggagcc
gccatggacctgctgcacccgtccgtgggttatcccgccaaccctcgaaagcagcggcgg
gaacgtacaaccttcacccggacgcagctggacatcctggagtctctgttcgccaaaacg
cgctacccagacatcttcatgagagaggaggtggcgctgaaaatcaacctgccagagtcc
agagtgcaggtttggttcaagaacaggcgagccaagtgtcggcagcagcagcagagcaac
aacagcgccaaggtaaaaccaatgaagaagaagtcgtctccgaccagggagagcactgga
tccgagagcagcggccagttcactccaccggccgtgtccagctcttcctcctccacctct
acctcctcctcctcctcctcctctgtctcctctggtcttggcggtcctgctttgatcagc
acttctacctccgtcaccgctccggtgtcgtccatctggagcccggcgccgatctccccg
gccccggcaccggccaacctgcccgacccggtcgctccaaccagtgcatcctgcatgcag
cgctccgcaacctcctcctcgaacggcggagcagcttcatatccggtatcctacagccaa
acggcggcggcgtacagccagggctacccggcctcggcgacgggctcctacttcagcggg
gtggagtgtggctcctacctggcacccatgcattcccaccaccacccacaccagctcagc
cccatgacaggctcctccatgactggacacccacaccaccatattggccagacaacaggt
caccaccaccaccaccaccaccacccgccacatcaccaccagacgtacagcgcgcccggc
ttggcctttaactccacagactgtctggattacaaggagcagactgcagcttcagcctgg
aagctcaacttcaatgctaccgactgtttggactacaaagaccaagcctcttggcgcttc
caggttctgtga
DBGET
integrated database retrieval system
