Xiphophorus hellerii (green swordtail): 116719795
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Entry
116719795 CDS
T07363
Name
(RefSeq) mast/stem cell growth factor receptor kita-like isoform X1
KO
K05091
proto-oncogene tyrosine-protein kinase Kit [EC:
2.7.10.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116719795
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
116719795
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116719795
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116719795
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116719795
Protein kinases [BR:
xhe01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116719795
CD molecules [BR:
xhe04090
]
Proteins
116719795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
DCAF15_WD40
Motif
Other DBs
NCBI-GeneID:
116719795
NCBI-ProteinID:
XP_032418381
LinkDB
All DBs
Position
5:11818935..11841951
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AA seq
979 aa
AA seq
DB search
MMMCPWVICASYFIFLPITAWSKPVIFPSEPHIVVPKKGKLQLRCHDNTTASGAPFLLRW
QREKNRKLEGEIEEGKVASLSLSGVQAQQMGWYVCVNNNTLENSSIFVYVKDPGSAFQHT
MMSSILVRAGEDCIIPCLVTDPEVANLSLETCDGRPLPSGMVYSGNLQRGIIIRNAREEI
KGCYRCVGQLGGNRVMSVSYSVDVRPVPELRPEVSLSHKDTVILKTGEAFELTCNSTNIN
SEFSLTWDFPSTANPVKSQISHILPSSRGYLRSTTLSIATVSQLDSGIYCCHAHNEKGHS
NAAMELDILDQGFITALGSHSPIQDVKEGESLTLRVEFKAYPAPRSIFWSYNKEHLLNTT
EHVITVHRQKYSFTSELRLVRVLSSEGGVYTFSVSNGDASVDRSFHVYVKSKPVIIAQEG
PVDGQVRCIAAGYPVPKISWYFCELPRTRCSNLPNATQWETPEVTVLSESTFGRSEVESR
LNVSNEHAQYHTLECVASMQGEEAYTLFTIRERIVPHKLFTPLLTGMLATGVFLSVILVV
LVYKYMQKPKFQIQWKVIESINGNNYIYIDPLQLPYDLKWEFPRQKLRFGKTLGSGAFGK
VVRATAYGLCSADTVTTVAVKMLKPNAHSTEKEALMSELKVLSYLGNHVNIVNLLGACTV
GGPILVITEYCCYGDLLNFLRRKRESFLNSQVGDSYYRNVSKQSEPTRDATGTGYIPMRP
SEKERSSQSGTSTFLSTLKLTVSLTKLDYEVFILDYIDELSLDAEDLLSFSYQVAKGMEY
ITSKNCIHRDLAARNVLLTHGRVAKICDFGLARDITTDSSYVLRGNARLPVKWMSPESIF
DCVYTFESDVWSYGILLWEIFSLGNSPYPGMQVGSAFYKMIQDGRRMSRPEFAPIEMYDM
MLSCWNDDPLKRPSFRKLVERTELLLSENTKNVYLTLSNTPNASEQQRAPSRRLSSVCST
TAPTQPLLQNTVDVFLDYV
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgcccttgggttatttgtgcctcatatttcatcttcctgcctattacagcg
tggagcaaacctgtcatcttccccagcgagcctcacatagtggttcccaagaaggggaag
ctgcaactgcgttgccatgacaacaccacagcgtccggagccccattcctgttaaggtgg
caaagggagaagaaccgcaagcttgagggagagatcgaggagggcaaggtagcttccctc
agcttgtcgggggtccaggcccaacagatgggttggtatgtgtgtgtcaacaacaacacc
ctggagaacagctcaatcttcgtttacgttaaagaccctggcagtgctttccagcacacc
atgatgagcagtattctggttcgggctggtgaggactgcatcatcccgtgtctcgtgact
gaccctgaggtcgccaacctgtctttggaaacctgcgatggacgacctttgccttcagga
atggtttacagtgggaatctgcagcgaggcatcatcatccgcaatgctagggaggaaatt
aagggctgctacagatgtgtgggacaactcggcggaaacagagtcatgtctgtctcatac
agcgttgatgttcgacctgtgccagagttgcggccagaggtcagcctgtcccacaaagac
acggtcatcctgaagacaggcgaggcatttgagcttacctgcaactccaccaatatcaac
tcagaattcagtcttacttgggacttcccttcaacagcgaatcctgtgaagtcccagatc
tcacacatcctgcccagctcccggggctatttacgttcaaccacactctccatagcaacc
gtcagccaattagattctggaatttactgctgccacgcccacaatgagaaaggtcacagt
aacgcagcaatggagctggatatacttgatcaggggttcattacagctttaggaagtcat
agtccaatccaagacgtcaaagaaggggagagcctgaccctcagggtggaatttaaggcc
tatcctgcaccacgctccatcttctggtcctacaacaaggagcacctcctcaacacgaca
gagcatgtcatcactgtccaccggcagaaatacagtttcaccagtgagctgagactggtg
agggtcctcagctctgagggcggggtctacacgttctcagtcagtaatggagacgcatcc
gttgaccgctcatttcacgtatacgtcaaaagtaagcctgttatcattgcgcaggagggg
ccagttgatggtcaggtccgctgcattgccgccggttatccagtacctaaaattagctgg
tacttctgtgagctgccccgcacaaggtgctccaacctacccaatgccacccaatgggag
accccagaggtcactgtactgtcagagtcaacgtttggcaggagtgaggtggagagccgc
ctgaacgtcagcaacgagcacgctcagtaccacactctggaatgtgtggcttccatgcag
ggagaggaagcctacactctgttcaccatcagagaacgcattgtcccccataaactcttc
acacctctcctaactggcatgttggctactggcgtcttcctcagcgtcattctagtggtg
cttgtctataagtatatgcagaaaccaaagttccagattcagtggaaggtcattgagagc
attaatggaaacaactacatctacatcgaccccctccagctgccatatgacctgaagtgg
gagtttcctcgacagaagcttcgctttggtaaaactctgggctctggggctttcggaaag
gtggtcagggccactgcatatggactttgctctgccgatactgtcacaactgttgctgtt
aaaatgttgaaacctaatgctcattccacggaaaaggaagcactgatgtctgaactgaag
gttcttagttatcttggaaaccatgtgaacatcgtgaacctgctgggagcctgcactgtt
ggaggcccaattttggtgatcacagagtactgttgctatggcgacctgctcaacttcctt
cgaaggaaaagagagtcattcctaaactcccaggttggggatagttactatcgcaacgtc
tccaagcagtctgagccgacaagggatgcaactggtacaggatacatccccatgcgtccc
tctgagaaagaaagatcctctcagtcaggtacttctacatttttatccactttgaaattg
acagtaagtttgacgaaacttgactatgaagtcttcattttagattacatagatgagctc
tctctggatgctgaagacctcctcagcttttcctaccaggttgccaaaggaatggagtac
attacctccaagaattgtatccacagggatcttgcggcgagaaacgttctgctgactcat
ggcagggtggcgaagatctgcgacttcggccttgcccgagacatcaccactgactccagt
tatgtactccggggaaacgctcgtctgcctgtcaagtggatgtctcctgagagcattttc
gactgcgtctacaccttcgagagcgacgtgtggtcctacggcatcctgctctgggaaatc
ttctctctgggaaatagcccgtatccagggatgcaggtgggatctgccttttacaagatg
attcaagacggccgcaggatgagcaggccagagttcgctcctatcgagatgtacgacatg
atgctgtcctgctggaacgacgaccctctgaagagaccttccttcagaaaactggtggag
agaaccgagctgctgctgtcagaaaacaccaagaacgtatacctgactctgagcaacact
ccaaatgctagtgagcagcagagggcgccatcgcggaggcttagctctgtgtgtagcacc
acagctcctacccagcctttactgcagaacacagtcgacgtcttcctggactacgtctga
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