Xiphophorus hellerii (green swordtail): 116719817
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Entry
116719817 CDS
T07363
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116719817 (tmc6)
03037 Cilium and associated proteins [BR:
xhe03037
]
116719817 (tmc6)
Transporters [BR:
xhe02000
]
Other transporters
Pores ion channels [TC:
1
]
116719817 (tmc6)
Cilium and associated proteins [BR:
xhe03037
]
Other cilia and associated proteins
Stereociliary proteins
116719817 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3576
Motif
Other DBs
NCBI-GeneID:
116719817
NCBI-ProteinID:
XP_032418421
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All DBs
Position
5:22249826..22270440
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AA seq
829 aa
AA seq
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MAHNVNFDLSHPRVEAGLESPADEEGVHDSFSQLIAEESQKEGLSDAIELQYQQRNPEDE
DRDNVAYLSPSENRRWRIGSDKTGEEDKGRQTDSLLKDSWSSATLKILSSMPSRTIGRSR
GAIISQYYNRTAELRRRTQRRASIKDFSRSARPSIRGYGVEVDTTDSAEKKQERLIQNLQ
NLSAVDRVRLLKEMPLNLSEKKGLRRLTLKMTKQTRSSSNLRCCSYLKFRIILALRHSWY
NCLSFLHSLHLWQMPLKRVSGRFGSGVLSYFLFLKTLLFFNMFLFLVLGSFLVVPQAVYP
PEQLENRKSFTGLELLTGGGYFANTLLYYGYYSNHTLHSCSKNNISSPPKPECDSKSLSY
NMPLAYFFTIGLSFFVTCIILVYSMSKSFGQSFRIDKSNGMLAMKVFCSWDFKVIKRSSV
RLLSENIRTQLKELLGEAHHRHIRSTISDKLVRLLMHGLGWILCIGATAGCVAVIYYFSD
YMHKEQLKSSQNDSGDPELLKEASLLALPVLVSFINLMLPILFQFTAWIEKYNSPSLRTF
VSLSRNLILKVSVLGVLCFHWLKRVAGSADNNKTFKCWESFVGQELYRFLIIDFIFTLLA
TLFGELLWRSFSDKVLKRNRRPGFDIAKNVLDLIYGQTLAWLGLLFAPLLPAVQILKLLL
LFYIKMSSVMMNCQAPSRAYRVSQMTTIFITLLCFPSFLGASVCVTYTMWRLPSSESCGP
FRGNKTMIQAGKQRIVELVKENPNLYFLAEAHTYLVENPLVLFVGATIFLIVIYFQSQVV
DGQRKIIALLQEQIENEGEDKKFLITRLQSVHERKRTPARNLTSQDSGC
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaatgttaactttgacctgagtcaccccagagtggaagctggactggaaagc
ccagcagatgaggaaggggttcatgattcattcagccagctgattgcagaagagagtcag
aaggagggactgtctgatgccatcgagctgcagtatcagcagaggaatccagaagacgag
gaccgagacaatgtggcgtatttgtcaccctctgagaatcggcgatggaggataggaagt
gataaaactggagaagaggacaaaggaagacaaacggactctctcctcaaggattcctgg
tcttcagccaccctgaagatcctctcctccatgccgagccgcactatcggccgcagccgg
ggagccatcatctctcagtactacaacaggaccgctgagcttcggagacgcacgcagaga
agagcgtccatcaaagacttctctcgctccgccagacccagcatacgaggctacggcgtg
gaggtggacactacagactcagcagagaagaagcaggagcgattgatccaaaacctgcag
aacttgtcggcggttgaccgagtgaggctgctcaaagaaatgcctctgaatttgtctgag
aaaaaaggcctcaggaggttgactttgaaaatgactaagcaaacacgttccagcagtaat
cttcgctgttgcagttatctgaaatttcgcatcattttagccttgaggcacagctggtac
aactgtttatccttcctgcactccctgcacctgtggcaaatgccgctcaagagagtcagc
ggacgcttcggctccggggtcctctcctacttcctgttcctcaagactctcctcttcttc
aacatgttcctttttctggtcttgggttcattcttggtggttccacaggcagtgtacccc
ccagagcagcttgaaaacagaaagtccttcactggactggagctcctcaccggagggggt
tactttgctaacaccctgctgtactacggatactacagtaaccacacactgcatagctgt
tcgaagaataacatctccagtcccccaaaaccggagtgtgactcaaagtccctgtcctac
aacatgccgcttgcatatttcttcacaatcggactgtccttcttcgttacatgcatcatc
cttgtgtacagtatgtcaaagtcgtttggtcagagcttcaggatcgataagtctaacggc
atgttggccatgaaggtcttctgctcgtgggactttaaggtcatcaagagaagctcggtc
aggctgctgtctgaaaacatccgcacccaactcaaggagctgctgggagaagcacatcac
aggcacatcaggagtacaatctcagacaagttggtcagactgctgatgcatggcctgggt
tggatactctgcattggagctaccgctggatgcgtggctgtgatttactacttctcagat
tatatgcacaaagaacagcttaaaagttcacaaaatgattccggggatccagagttatta
aaagaagccagcctgttggctctgcctgtcctggtctccttcatcaacttgatgttaccg
atcctcttccagttcacagcctggattgagaagtacaattctccatctctgcgcacgttt
gtttcactcagtcgaaacttgatattaaaggtgagcgtgctcggagtcctctgcttccat
tggttgaaacgggtggctggcagcgccgataataacaagacattcaagtgctgggagagt
tttgttggtcaggagctttaccgcttcctaatcatcgacttcatcttcactctgctggct
accctgtttggagagctgctttggaggtcattctctgacaaagtgctcaagcgaaacaga
agaccggggtttgatatcgccaagaatgtcctggacctcatctatggacagacgttagcc
tggttgggtcttctcttcgctcctctcctgcctgctgtgcagatcctcaaactgctgctg
ctcttctacattaagatgagcagtgtgatgatgaactgtcaggcccccagcagggcatac
agagtcagccagatgaccaccatcttcatcaccctcctgtgcttcccctccttcctcggt
gcctccgtgtgcgtcacatacaccatgtggaggctcccatcctcagagtcatgtggtcct
ttccgtgggaacaaaaccatgatccaggcggggaaacaaaggattgttgagctggttaaa
gaaaaccccaacttgtactttctggctgaagctcacacctatttggtggaaaatcccctt
gtcctgtttgtgggagcaaccatctttctgatagtcatttacttccagagtcaggtggtg
gacggccaaaggaagatcatcgctttactgcaggagcagatagaaaacgagggagaagac
aaaaagtttctaattacccggcttcagtccgtccatgagcgcaaacggaccccagcgaga
aatctcacaagtcaggactctggatgttaa
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