Xiphophorus hellerii (green swordtail): 116719836
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Entry
116719836 CDS
T07363
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116719836 (rhbdl3)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
116719836 (rhbdl3)
Peptidases and inhibitors [BR:
xhe01002
]
Serine peptidases
Family S54: Rhomboid family
116719836 (rhbdl3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_5
AIF-1
EF-hand_4
EF-hand_11
EF-hand_9
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
116719836
NCBI-ProteinID:
XP_032418460
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Position
5:complement(10392331..10447941)
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AA seq
415 aa
AA seq
DB search
MEESSPRMTGGTREAPVNISPAVAAHAEGEEIEVLESTDVLPVAPEEVQWKSLFDQYDPE
NSGFISTERFRDLLATHGSELDPHKLEVLLALADGNSDGKICYQDFVNLMSNKRSNSFRR
AILQGSRQLKGCSLRDEVGLGLSQRLVRHVAYETLPREVDRKWYFDSYTYCPPPWFILAI
TIAEVAVFMYYGIQLDRLVLQVSSPSFLKSPLPYHPQLRTQAWRYFSYVFMHTGIEHLSL
NMAMQLLVGVPLEMVHGALRIGLIYVCGALAGSLAVSVTDMTAPVVGSSGGVYALVSAHL
ANVVMNWSGMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVLV
GLTLGVVVLQNYEQRLQEQSLFWIFFCVYTLFVLCAVFWNVFAYSLLDVRIPPAP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagcagcccgaggatgaccggcggaacccgggaggctccggtgaacatctcc
ccggcggtggctgcccacgcagagggcgaggagatcgaggttttggagagcaccgacgtc
cttcccgtagctccagaagaagtacaatggaaatctctgtttgaccagtacgacccggag
aattcaggcttcatcagcacagagcgcttcagggacctgctggcgacgcacggctctgaa
cttgatccccacaaactggaagtgttgctggctctcgctgatggcaactctgatggaaaa
atctgctaccaggactttgtcaacttgatgagcaacaagcgctccaacagtttccggagg
gccattctgcagggcagcaggcagctgaagggctgcagtctcagagatgaggtgggcttg
gggctgtcccagcggctggttcgccatgttgcctatgaaacgttgccccgggaggttgac
cgcaagtggtactttgacagctacacatactgcccccctccttggttcatcctggctatc
accatcgcagaggtcgcagtgttcatgtattatggaatccagttggatcgtttggtcctg
caggtatccagtccgtccttcctaaaaagccccctaccctaccatccccagctccgaacc
caagcctggaggtacttcagctacgtctttatgcatactgggattgaacatctgagcctg
aacatggccatgcagctgctggtgggagtgcctcttgaaatggtccatggtgccctgagg
atcggactgatctacgtgtgtggtgcgctggcagggtctctggcggtgtcggtcactgac
atgacggctccagtggttggatcgtcgggaggagtgtacgcccttgtctcggcacatttg
gccaatgttgtaatgaactggtcgggaatgaagtgtcagtttaagttattccgaatggcc
atggccctggtttgcatgagcgtagagtttggtcgggctgtgtggctgcggttctaccct
ccagctttccctccgtgccccaaccccagctttgtagctcacctggggggagtcctggtg
ggtctcaccctaggcgtggtggtcctgcagaactacgagcaacggcttcaggagcagtcg
ctgttttggatatttttctgcgtttacaccttgtttgtgctctgtgctgtgttctggaac
gtttttgcctacagcctgctcgatgtgcgaatacccccggcaccatga
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