Xiphophorus hellerii (green swordtail): 116719861
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Entry
116719861 CDS
T07363
Name
(RefSeq) keratin, type I cytoskeletal 19-like
KO
K07604
type I keratin, acidic
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116719861
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116719861
04147 Exosome [BR:
xhe04147
]
116719861
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
116719861
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
116719861
Exosomal proteins of other body fluids (saliva and urine)
116719861
Exosomal proteins of colorectal cancer cells
116719861
Exosomal proteins of melanoma cells
116719861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC138_cc
Plectin_PPL
GapR_DNA-bd
ARF_AD
DUF2461
Baculo_PEP_C
Prefoldin_2
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
116719861
NCBI-ProteinID:
XP_032418503
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All DBs
Position
5:complement(21958622..21961672)
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AA seq
424 aa
AA seq
DB search
MSRPFPLCCYITRESQWCFVLQIISSCSCWFRSKLSKMSLSSRSFGQRSTAQKTMSVYGG
AGGSGTRISVGQIDYLSRSGAINTNNLDLHVDANEKATLQNLNDRLASYLEKVHKLEKEN
ERLEKQIAEWYTSKTVISHDYSAYMATIEDLQNKIRHATTLYARTNLEIDGSELAADDFK
MKFETELSMRQAIEGDIAGLKKVLDDITLAKMNLESQWESLKEELIMLKRSHEEDISLLR
KQIGGQVNVEVDASSPVDLSQIMTEIREHYEALIAKNRKELEMWYHKKMTSEGKVVEEQT
TSLEGFRLEMKDLKITVQRLQIELESNFSMKSSLEASLQETQQRYAAQLAGFQVVVTGLE
TQISDVNAALEEKRQMYSTLLDLTTRLEAEIVEYRRLLDGEDNSGSKQVITKTTTVQETY
VDGK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcccttcccactttgctgctatataaccagggagtcccagtggtgttttgta
ctgcagatcatctccagttgttcttgctggttcagatccaaactttccaagatgtctctc
tcctccagatcctttggccagaggtccactgctcagaagaccatgagtgtctacggcgga
gcaggaggttctggcacccgcatctccgtaggccagattgactacttgtcccgttcagga
gccatcaacaccaataatctcgatctccacgttgatgccaacgagaaggccacgcttcag
aacctgaacgaccgtctggcctcctacctggagaaggtgcacaaactggagaaggagaac
gaacggctggaaaagcagatcgcagagtggtacacaagcaaaactgtgatcagccatgat
tacagtgcctacatggccaccatcgaagatttgcagaacaagatccgacatgccaccaca
ctctacgctaggaccaacttggagattgacggttcagaactggctgctgatgactttaaa
atgaaatttgagaccgagctcagcatgaggcaggctatagagggcgacatcgctggactg
aagaaagttttggatgatatcactctggcgaaaatgaatctggagagtcagtgggagtct
ctgaaggaggagctcatcatgctgaagaggagccacgaggaggacatttctctgctgagg
aagcagataggcggccaggttaacgtggaggtcgacgcttcttctccagtagatctgagc
cagatcatgacggagatcagggagcactacgaggctcttatcgccaagaaccgcaaggaa
cttgagatgtggtaccacaaaaaaatgacgtcagaggggaaggttgtagaagaacaaaca
accagtctggagggattccgcttggagatgaaagacctgaagatcaccgtgcagaggctt
cagattgaactggagtccaatttcagtatgaaatcatctctggaagcatctctgcaagag
actcagcaacgctacgctgcccagctggcaggtttccaggttgtggtcacgggcctggaa
actcagatatcagatgtaaatgctgcgttagaggagaagagacagatgtacagcactctt
ctggacctcacaacccgtctggaggcagagattgtagagtacaggaggctgcttgatggg
gaggacaacagcggctctaaacaagtgataacaaagaccaccactgtgcaggagacatat
gtggatggaaaatag
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