Xiphophorus hellerii (green swordtail): 116719974
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Entry
116719974 CDS
T07363
Name
(RefSeq) nocturnin-like isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116719974
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
116719974
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116719974
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
116719974
NCBI-ProteinID:
XP_032418771
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Position
5:complement(18340682..18356349)
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AA seq
392 aa
AA seq
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METLVCPMGGGATRLYNTLTQTFSGSSSPLSIPPSYLSPHQPALTNLDSDFCLQQKSAPI
CPLDPVELLQQCEEALRDRPPHLHRNFVYINNGDDIASIPIRVMQWNILAQALGVGVDNF
VRCPLEALSWSRRRSLILEEILAYRPHILCLQEVDHYYDTFQPVLANLGYSSHFYPKPWS
PCLDIEGNSGPDGCALFFDESRFELLDSVNIRLSAMMIPTNQVAVVTTLRCRSSGRYVCV
AATHLKARSGWEWFRSAQGSDLLWHLQNLVQKLVGGNSNVKVPLLICGDFNAVPSEEVYR
RFATSPLGLDSAYKKLSQDGVSEPEYTTWKIRGTGECCCTLDYIWYTKDTLRVDAVLDIP
DEEQIGPNRLPSYSYPSDHLSLVCDFSFREKE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggagactttagtgtgtccgatgggtggaggagccaccaggctgtacaacaccctgact
cagacgttcagcggcagcagctcccctctgtccatcccgccatcctacctgagcccccac
cagcccgctcttaccaacctggattcagatttctgcctgcagcagaagagcgccccgata
tgcccccttgatccagtggagctgcttcagcagtgtgaagaggccctcagggaccgacct
cctcacctgcatagaaactttgtctacatcaataatggagacgacattgccagcatcccc
atcagggtgatgcagtggaacatcctagcccaagctctgggcgtaggagttgacaacttt
gtccggtgtcccttggaggccctcagttggtcccgaagaaggagcctcatcctggaggag
attctggcctaccgacctcacatcctgtgtctgcaggaagtagaccactactatgacacc
ttccagccggttttggcgaatctggggtacagcagccatttctatccgaaaccctggtct
ccatgcctggacatagaaggcaacagcggtcccgatggttgtgccctcttctttgatgag
tcccgattcgagctcctggacagtgtgaacatcagactctccgccatgatgatccccaca
aatcaagttgctgtggtgacgactctgcgttgtcggagcagtggaaggtatgtatgcgtc
gctgcgactcacctaaaagcccgatctggctgggagtggttccgcagcgctcaggggtcg
gacctcctctggcaccttcagaatctggtccagaagctcgttggcggcaactccaacgtc
aaagtccccctgctgatttgtggcgatttcaacgcagtcccgtcggaggaagtataccga
cgcttcgccacttcccctctaggtttggactctgcttataagaagctcagtcaggacggc
gtgagtgagccggagtacacgacatggaagatccggggcaccggggagtgctgctgcacg
ctggactacatctggtacactaaagacacactgagagtggacgctgtcctggacatccca
gacgaggagcaaatcggacccaacaggcttccatcctacagctatccatccgaccacctc
tctctggtttgcgacttcagcttcagggagaaggaataa
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