Xiphophorus hellerii (green swordtail): 116719989
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Entry
116719989 CDS
T07363
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1 isoform X1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04081
Hormone signaling
xhe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116719989 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
116719989 (smad1)
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GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
116719989
NCBI-ProteinID:
XP_032418814
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Position
5:4149835..4171746
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AA seq
492 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEYPFGSKQKDV
CINPYHYKRVDSPVSDQYSHALQHYQQQEQQQQLYTPSVLPPVLVPRNSEFNAKHTMLPR
FRNPLQQNEPHMPQNATFPESFTQANTVPFPHSPGNGFPSSPGSGSNTTFPHSPSSTDPG
SPFQLPETPPPAYMPPEEQMTQDCPQPMDINLMAPPLPTETNNRADVQPVAYEEPKHWCS
IVYYELNNRVGEAFQASSTSVLVDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKG
VHLYYVGGEVYAECLSDSSIFVQSRNCNYHHNFHPTTVCKIPSRCSLKIFNNQEFAELLA
QSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQ
MGSPHNPISSVS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttacttcgctcttctccttcaccagcccggccgtcaaacggctgctgggctgg
aagcagggcgatgaagaggagaagtgggcggaaaaagccgtggatgctctggttaagaaa
ctgaaaaagaagaagggagccatggaggagctggagcgggcgctcagctgcccgggtcag
cccagtaactgcgtgaccatccctcgctcgctggacggacggctgcaggtgtcccacaga
aagggtctgccacatgtcatttactgccgggtgtggcgctggcctgacctgcagtcccac
cacgagctgaaggcgctggaatgctgcgagtatcccttcggctccaaacagaaggatgtg
tgcatcaacccctaccactataagagagtggacagtccagtctcagatcaatacagccat
gccctccagcactatcagcagcaggagcagcaacagcaactttataccccatcagtgttg
cctcctgttttggtaccgaggaacagcgagttcaatgccaagcacacaatgctgcctcgc
ttccgcaacccgcttcagcagaacgagccgcacatgccccagaatgccaccttcccagaa
tccttcactcaggcaaacactgttcctttccctcattctccgggaaacggcttcccaagc
tcacccggaagcggcagcaacaccaccttccctcactcgccatccagcaccgatccggga
agtccgttccagctgcctgagacccccccacctgcttacatgcccccagaggagcagatg
acgcaggactgtcctcagccaatggacatcaacctcatggctccacctttgcctacagaa
acaaacaaccgggcagatgtgcagccggtggcctacgaggaaccaaagcactggtgctcc
attgtttactatgagctgaacaatcgcgttggcgaggcctttcaggcttcctccaccagc
gttctcgtcgacggcttcacagatccctccaacaaccgcaaccgcttctgcctcggcctg
ctctccaacgtcaaccgcaactccaccatcgagaacacccggcggcacatcggcaaaggc
gttcacctgtattacgttggaggggaggtgtacgcagagtgcctgagcgacagcagtatc
ttcgtccagagtcgtaactgtaactaccaccataacttccaccccacaactgtgtgcaag
attcccagcagatgtagcctgaagatcttcaacaaccaggagtttgccgagctgttggcc
cagtccgttaaccacggtttcgaggccgtctatgagctcaccaagatgtgtaccatccgg
atgagcttcgttaagggctggggagcggagtaccaccgtcaagatgtgaccagcacgccc
tgctggattgagatccacctgcacggtccattgcagtggctggataaagtcctgacccag
atgggttccccccacaaccccatttcctctgtctcatag
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