Xiphophorus hellerii (green swordtail): 116720064
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Entry
116720064 CDS
T07363
Name
(RefSeq) hemicentin-1-like
KO
K06467
CD22 antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116720064
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116720064
04090 CD molecules [BR:
xhe04090
]
116720064
04091 Lectins [BR:
xhe04091
]
116720064
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SIGLEC family
116720064
CD molecules [BR:
xhe04090
]
Proteins
116720064
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116720064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
C2-set_2
Ig_CD22
C2-set_3
Motif
Other DBs
NCBI-GeneID:
116720064
NCBI-ProteinID:
XP_032418975
LinkDB
All DBs
Position
5:7579924..7592667
Genome browser
AA seq
819 aa
AA seq
DB search
MWPTRGCDWKRRKAAMNLSTAASLFLIVLFCEEVQSKWNVNCNSQNICALKGSTVRMHCD
YSHPYWEDGIDIKVEKTFWFTKIDKDPLDLKTQEEYAGRVENRCISKVCTLTIRDVKESD
SAAYKFRFITNKSGGSYTGPQVVLSVRDSNPNLTVKKNYYNLECSSSCVLPDDSTYVWYK
SGKDMNTRTHDYNEWVDYGDSISCALKGREDFPSPLACFKSRSCNKVTYSHGRICALKGS
SVSFYSNYNSYHSSYYTTFWFSPERSTEWNDISKPQDLKLDSKYLGRVSVTNIRQTSTLT
INNLMENDSAEYRFIFKTYSFSWGSDLHGTTLTVTGLQVEVTRISANQDSPYAELKCHSR
CTPAGYYNYIWFRNGQDIRHNKSTFKVLINTTDKISCALSSFKELRAPEVYAPVSTSVSA
DFTDDIVEGNQVFLKCSSNANPPANYTWYKKTQSSTLQLHRKDSEVYLREIQTSDSGEYF
CVANNQLGESISEYLNIDVKYAPKLADLSLSHVEIVEGDSVHLTCSSDGNPTPSYSWYKD
NQVMLQGQGGVYQFTSVTSEDSGTYCCEVGNKYGRINSSTVLINVEYPPRLPSVSVNPPG
DVAAGSSVNLTCSSVANPAATYTWYKEHSASPAADGQTFTIVDIRGEHGENYYCQARNSR
GHHNSTVHLIVVSSSASSAVAGLITILLLIGLFLSAFIIFRKKKVVRQIHQSREGAEDNE
TKRLGNLGRHMGSSSTAGLGNSVDQGDVCYASVLFSKNQEESLYSNFVPAEPKTSQNEEK
EENVEYSAIMIKNTPCKKSYDASEESSALYSTVCKVNRL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtggccaacacgcggatgtgactggaagaggagaaaagcagccatgaatttatctaca
gcagcgagtctttttctcatcgttctcttctgtgaagaggtacagagtaagtggaatgtg
aactgcaactcccagaacatctgtgccttaaaaggatctacagtgagaatgcactgcgac
tatagtcacccatactgggaggatggcatagacatcaaggttgagaaaacattttggttt
actaagattgataaggaccctttagatttgaagacacaggaggagtatgcgggtcgcgtg
gaaaacagatgcatttcaaaagtttgcactttgacaattagagacgtgaaagagagcgac
tcggctgcgtacaagtttaggttcatcacaaacaaatcaggtggaagttacactggtcca
caagtcgtgttatctgtcagagattcaaatccaaatctaactgtcaagaagaattactat
aatttagagtgttccagttcatgtgttttacctgatgactctacatatgtgtggtacaaa
agtggaaaagatatgaacacaaggacacatgattataacgaatgggtggactatggagac
agcatatcctgcgctctgaaaggacgtgaggatttcccttctccattagcctgtttcaag
agtaggagttgtaataaagtgacttacagtcatggaagaatctgtgcattgaaaggttct
tcagtgagcttttattccaattacaattcatatcactcttcatattataccacgttctgg
ttcagtcctgaacgcagcacagaatggaatgatatctcaaaacctcaagatcttaaacta
gactctaaatatttgggtcgagtgagtgtcactaacataagacaaacgtccaccctgaca
attaataacttaatggaaaatgattcagcagagtatcgattcatattcaaaacatactcg
tttagctgggggagtgatttacacggaacaactctgactgtcacaggtctacaggtggaa
gtgacaagaatttcagccaaccaggattcaccatatgcagaactgaaatgtcacagcaga
tgcactccagctggttattacaattacatatggttcaggaacggacaggacattcgtcat
aacaaatctacttttaaagtgttgattaatacgacagacaaaatctcctgtgctttatca
tcgtttaaggaactcagagctcctgaagtgtatgctccagtttcaacctctgtgtcagcc
gatttcactgatgacatagttgaaggcaaccaagtgtttctaaagtgtagcagtaatgct
aatccacccgctaattacacttggtacaagaagactcaatcgtcaactcttcaacttcac
agaaaagattcagaggtttacctgcgtgaaatccagacgtctgactctggggaatatttc
tgcgtagccaacaaccagttgggggaaagcatatctgagtaccttaatattgatgtgaaa
tatgctccaaaacttgcagatctttccctgagtcacgtagagatagtggagggtgattca
gtacatctgacctgcagcagtgatggaaacccaacaccttcttacagttggtacaaagac
aaccaagtgatgcttcaaggacaaggaggcgtatatcagttcacttctgtcacgtctgag
gacagcgggacgtattgctgcgaggttgggaacaaatatggacggatcaactcttcaact
gttcttataaatgtggagtatcctccaaggcttccctctgtgtctgtgaatcctcctggt
gacgtagcagcaggtagttcagtgaatctgacctgcagcagtgtcgctaaccctgcagct
acgtacacctggtacaaagagcattcagcttccccagcagcagatggacagacgtttacc
attgtggacatcagaggtgaacatggtgaaaattattactgtcaagccagaaatagcagg
gggcaccataactccaccgtacatctgattgtggtttcaagttctgcttcatctgctgtt
gctgggttaatcacgattctactcctgattggtttatttttgtctgccttcatcattttt
agaaaaaagaaggttgtacggcaaattcaccagagcagagagggagcagaagataacgag
acaaagagattgggtaacttgggccgacatatggggagttcatcaactgcaggacttgga
aattcagtagatcaaggtgacgtttgctatgccagcgtacttttctctaaaaatcaagag
gaatctctttactccaactttgtgccagctgaacccaaaacatctcaaaacgaggaaaag
gaggaaaacgtggagtattcagcgatcatgatcaagaacacaccttgtaagaaaagctat
gatgcttcagaggaatcatctgcactgtacagcacagtctgcaaagtcaacagattataa
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