Xiphophorus hellerii (green swordtail): 116720110
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Entry
116720110 CDS
T07363
Name
(RefSeq) serum response factor-like
KO
K04378
serum response factor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116720110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116720110
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
116720110
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
116720110
NCBI-ProteinID:
XP_032419083
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Position
5:complement(136114..140010)
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AA seq
469 aa
AA seq
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MATRTGAGNGSVAVSSAGPEPTAGQETDGEPFEDLEFSTEVVYSGSDQDSESGDDEDAVG
SGGDRRGVKRERSEHGQSGRSSGGPNRAYSGGNSALSGAKPGKKTRGRVKIKMEFIDNKL
RRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALI
QTCLNSPDSPPRADPSGDQRMSATGFEETDLTYQVAEADAAAEGAKDPVKPAFGPPSSSS
SGPLQSGAPSWQPPASSSNGAVLKTPAGVVLPGGLTLMSGAQLPPGTHTIPLSQLQGPAP
ALQAPPTQPTTLLRLPATVSLTGGGVSQQLQTIQVQPSSQQTSNHSGSDTCSPASSTAGL
SVVSSSSSTSSAASHMMYPGGPTVMYATPSPSLADGGLAVLNAFPAGHTPSHDPGAVQQV
FLTSLPPVAAQIPVSAVQLHPMVIGAPGGGGGLAELQVVSLDVHQSKED
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagaaccggggcaggtaacggcagtgttgcggtgagctccgcgggacccgaa
ccgaccgctggacaggagacggacggcgaacctttcgaggacctggagttcagcaccgag
gtggtctacagcggctcggatcaggactcggagtccggggacgacgaggacgccgtgggt
tccggcggggaccggaggggcgtgaagcgggagcggagcgagcacggtcaatctggccgg
tcctccgggggcccgaaccgggcttacagcggcggaaactccgcgctgtcaggagccaaa
cccgggaagaagacccgagggcgggtcaagatcaagatggagttcatcgacaacaagctg
cggcggtacacgacgttcagcaagaggaagaccggcatcatgaagaaggcctacgaactg
tccaccctgactgggacccaggttctgctgctggtggccagtgagacgggtcacgtttac
accttcgccaccaggaagctgcagccaatgatcacctcggagacgggcaaggcgctgatc
cagacctgcctcaactcgcctgactcgccgccgcgcgccgacccgtccggcgaccagcgc
atgagcgccaccggcttcgaggagaccgacctgacctaccaggtggccgaggcggacgcc
gccgccgagggcgccaaggatccggtgaagccggccttcggcccgccttcctcctcttcc
tccggccccctgcagagcggcgccccctcctggcagcctccggcctcctccagcaacggc
gcggtgctgaagactcctgcaggagtggttctccctggaggactcaccttgatgtcaggt
gcccagctgccccctggcacccacaccatccccctcagccagctgcagggccccgccccc
gcgctccaggctccgcccactcagccaaccacgctgctccgcctccccgctaccgtttct
ctgacaggaggcggagtctctcagcagctgcagaccattcaggttcagcccagtagtcag
caaacatccaatcacagcggctctgacacatgcagccccgcctcctccacagctggtctc
tctgtggtctcttcttcctcctccacttcctccgcggcgagtcacatgatgtatcctggt
ggtcccacggtgatgtacgccacgcccagcccctctctggccgacggcggcttggccgtc
ctcaacgccttccccgccggccacaccccgtcccatgacccaggtgcggtccagcaggtc
ttcctcacatctcttcctccggttgctgctcagatcccggtttctgctgtgcagctgcac
ccgatggtgatcggtgcgcccggcggtggcggcggtctggcagagctgcaggtggtcagt
ctggacgttcatcagtccaaggaggactga
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