Xiphophorus hellerii (green swordtail): 116720207
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Entry
116720207 CDS
T07363
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43-like
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116720207
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116720207
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116720207
Peptidases and inhibitors [BR:
xhe01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116720207
Ubiquitin system [BR:
xhe04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116720207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116720207
NCBI-ProteinID:
XP_032419230
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Position
5:9835735..9959500
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AA seq
1227 aa
AA seq
DB search
MDSRKESNTRKQSMKSKSSKEQKYRSGKFVRRKSLRSFGNFMGRILKTLGTLAHLGDAEP
PDAEEDDGGFVRSASGGCDFSQTSREGAAKRGSAVSSYHGSVKERLSWCYGDKTPGVLGL
KNHGNTCFMNAVVQCLSNTDLLAEYLGLGQYKSDISSGRANGEMRADETRSSEGEVTEQL
ASLVRALWTLDYTPQMSGEFKSIVSKYASQFRGNSQHDALEFLLWLLDRVHEDANPTPDN
NSSSKTKASSKATSASENPSSLPSTQQPRGRHSFVQEHFQAQYRSSLTCPHCLKQSNTFD
PFLCISLPLPLRQTRPLCVTLVFSTKGQRYLRVGLAVPLFGSVSSLRAMVAAEGNIAPDQ
VILSELYSTGFQRSFSDDDDLTAIADSDVVYAFQAPPNSSRGGSVPHSGYHHSLPSSPYS
STTGPNGQKLPASGRLSSEYLNQSSSSKVLLLMCNTTGSGQQAARFGPPFLMLEDRNISW
EQLQQSILSQQYYLMLNGSQAQNAGVEFKVRVVSGSTAYSYLSPKDSRPLCHPAVDRALK
FCGPGGPPHVKLVIEWDHSSKERLFGSIHEEVVKDAESVRSQQQQHLQQHNCTLDECFQL
YTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLSTLVRF
PLTALNMAPHVAKSSQSMKNLHSGSSSSSRKQPSGQTHHPADSLLPQDCLYDLYAVCNHH
GGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPEDEVCTKGAYILFYQKRNVIPLWSASSS
VRGSISSSVSDHWLIRLTGESKRGSLVSPSSNNISSLSDSAEPPVFHNKDFEEERGGFES
RPFVRGLQGRSVSMRVPSKPKESLSKKLPLRWSLGSKERRKPEQMSPPTQDPDPAELVEY
LESGRRPRCTKDSIVNLMNESRSSKKPSVGRAASVRSATVGSMSCVGKMEEEPHYSQVPE
GQRRPLERTSEKTSGKTASLRRKKENVAKEESSGNMSASSGSNTLSRKKEGRRESSAKSS
QDSERKLSSSTGVRHSYSTSSLQDGTLRRQKGDKANKDHHSSEADKSKTIKDEVPKSQDS
LFSFLKGNFLKKDKNSKKSKDGESEKKGGEEKGRRTSSRTSLPNGAAGGRTGVEGSKSNS
SGRRIDELANGKLGRSTADIRRSQSSSNIPTKAEQSIRRTASLHRNGMSTTPAQRLTTDK
QSYSTLQRNRYSTHSLGRKKTVPESSF
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggacagccgcaaggagagcaacacaagaaaacagtcgatgaaatccaaatcgtcgaag
gagcagaaatacagaagtggaaagttcgtcaggaggaaatcgctgcgttcttttgggaat
ttcatgggaaggatcctgaaaactttgggcactttagcgcacttgggcgacgcagagccg
ccggacgcggaggaggacgacggcggcttcgtgcggagcgcctcgggcggctgcgatttc
tcgcagacctccagggagggagccgcgaagaggggctccgcggtgtcctcctatcacggc
tcggtgaaggagaggctgtcgtggtgctacggcgacaagactcccggcgtgttgggactg
aagaaccacgggaacacctgcttcatgaatgccgtggtccagtgtctcagcaacacggac
ctgctggccgaatacctcgggctggggcagtacaagtcggatattagcagcgggagggcg
aacggtgagatgagggcggatgagacgcggagctccgagggtgaagtaaccgagcagctg
gcgtcgctggttcgagcgctgtggacgctggactacaccccgcagatgtctggagagttc
aagagcatagtgtcaaaatacgcctctcagtttcggggaaactctcagcatgatgcactt
gagtttctcctctggctgctggacagagttcatgaagatgccaatccaactcctgacaac
aacagcagcagcaagaccaaagccagcagtaaggcaaccagtgcgtcagagaatccttcc
agtttacccagcacacagcagcctcggggtcgccacagctttgtccaagaacactttcag
gctcagtacaggtcttccttgacgtgccctcactgccttaagcaaagcaacacctttgac
ccatttttatgcatctctctaccgcttcccctgcgacagaccaggccgctgtgtgtgacg
ctggtgttcagcacaaagggtcagaggtacctgcgagtggggcttgctgtgcctctgttt
ggttctgtatcgtccctgagagccatggtagcagcagaaggcaacatcgctcctgatcag
gtcatcctgtccgaactttactccaccggtttccagcgttccttttcagatgacgacgac
ttgaccgccatcgccgatagcgacgtcgtctacgccttccaggctcctccaaacagcagt
cgtggaggctctgttcctcactcagggtatcaccacagcctcccatcatctccatactcc
tccaccacagggcccaatggtcagaagttgcctgcatcaggacgactctcctcagagtac
ctgaatcagagcagctcctccaaggttctcctgctcatgtgcaatacaactgggtctgga
cagcaagctgccagatttgggcctccttttctcatgcttgaagacaggaatatctcgtgg
gagcagctgcagcagagcatcctcagccagcagtattatctcatgctgaatggatcccag
gctcagaatgctggcgttgaatttaaggtcagagtggttagtggatccacagcctacagc
tacttgtccccaaaggacagtcgaccattgtgccaccctgcagttgacagagctttaaag
ttttgtggaccaggaggacctcctcatgtgaagcttgttattgagtgggaccacagctct
aaagaacgtttgtttggcagcatccatgaggaggtggtgaaagacgcagagagtgtcaga
agccagcagcagcaacacctgcagcagcacaattgcaccttggacgaatgcttccagctt
tataccaaagaagaacagcttgctccagacgacgcctggaagtgtccgcactgtaagcag
ctgcagcagggcatggtgaagatgagcctgtggacgctgcctgacatcctcatcctccac
ctcaagcgcttccgtcaggttggtgaacggaggaacaagctgtctaccctggttcggttc
cccctgactgcgctgaacatggcccctcatgtagcgaagagtagtcaaagtatgaagaat
ctgcattcggggtcttcttcctcttcccggaaacagccttcaggccaaactcatcatcct
gctgactcactcctcccgcaagattgcctgtacgacctctatgctgtgtgtaaccatcat
ggaggaatgcatggaggacactatacagcttactgtaggaactctgtggatggccagtgg
tacagctacgatgacagcagcgtggatctggtgccagaggacgaagtgtgtaccaaggga
gcttacatccttttctaccagaaacgcaacgttattcctctgtggtcggccagtagctct
gttcgaggatccataagttcatcagtgtcggaccactggctaatcagactaacaggggag
agcaagagaggcagtttggtgtctccttcctccaacaacatctcgtctttatcagactct
gcagagcctcccgtgttccacaacaaagactttgaagaagaaaggggtggctttgaaagc
cgcccgtttgtgcgagggcttcagggacgcagcgtaagtatgagagttccctccaagcca
aaagaaagcctgagcaaaaagcttcctttgcgctggtccctcggttcaaaagagagacga
aaacctgagcaaatgtctcctccaacgcaagaccccgaccctgcagagctagtggagtac
ttagagtctggtcgacgaccccggtgcaccaaggattcaatagtaaacctgatgaatgag
tcgcgtagcagcaaaaaaccctctgtaggtcgggcagccagtgttcgatctgcaactgtt
ggcagtatgagttgtgttggtaagatggaagaggagccacattactcccaggttccagag
ggtcagagaaggccgttggaacgaacgtcagaaaagacatctgggaagacggccagtctg
agacggaaaaaggaaaacgtggcaaaagaagagagctcagggaatatgagcgctagctct
ggtagcaacaccctttccaggaagaaggagggcaggagggagagctctgctaaatcttca
caagattcagagagaaaactgagttccagcaccggagtccgtcatagttacagcacatca
agccttcaggatggaactctaagaaggcaaaagggagacaaagcgaataaggatcaccac
agctctgaagcagacaagtcaaagacaataaaagacgaagtgcccaagagtcaagacagt
ctcttctcgtttctaaaaggcaacttcctaaagaaggataagaactctaaaaagtccaag
gatggtgagtcagaaaaaaaaggtggtgaagagaaaggcaggaggacttcgtccaggacg
tcattacctaacggagcagctggaggaagaactggagtggaaggaagcaaatcaaatagt
tcaggccgtcggattgatgaactggcaaatggaaagttaggacgctccacagctgacatt
agacgctcgcagagctcctctaacattcccactaaagcagagcaaagcatacgcaggaca
gcgtccttacatcgtaatgggatgtccacaacgccagcacaacgtctgaccacagacaaa
cagtcttacagcactctgcagaggaatcgctacagcacacactcgctgggccgcaagaag
actgtccccgagtccagcttctga
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