Xiphophorus hellerii (green swordtail): 116720223
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Entry
116720223 CDS
T07363
Symbol
myom2
Name
(RefSeq) myomesin-2 isoform X1
KO
K24495
myomesin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116720223 (myom2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116720223 (myom2)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116720223 (myom2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
Ig_J_second
Ig_VEGFR-1-like_5th
C2-set_3
C1-set
Motif
Other DBs
NCBI-GeneID:
116720223
NCBI-ProteinID:
XP_032419248
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All DBs
Position
5:complement(6835433..6869679)
Genome browser
AA seq
1495 aa
AA seq
DB search
MASKVIPWYKKKAVSQVKTDYAYHHSKHVVKQQTERKSSFQSAQQVQTQATEAMAEPAYT
IPASRQRTTAETEEYQRVSSNVGKGLAVIQEELHRMRIATKAQVESIAIQKEVKDMMKKR
VDLLEEIPKMPDFLVALRPHTVWEKTPVKLFCTVEGNPRPIVKWYKGGVPVDPLSAPGKY
KIESKYGVHSLIISRCVVSDTAEYSAVATNQHGTATSKAMVIVKRPSGAGESCQLGLVPH
LTEIHPSKLEVTLLERFPVSFGVEGSSIRLSCTMVVVPDLPNVPPLAQWYRDDTLLKPSN
LVEMSVGGGAASLTLPQLAKDDEGLYTLRIFTKDGTAEHSAYLFVSDAPASVKGAPGAPM
SVKAYDVNSDYVLVAWKPPNTVNEAPITGYFVDRCEAGTDTWVQCNPAPVKVCKYPVSGL
DVGHSYYFRVRAVNSAGISRPSRKSGKVTAIDAAESQRLQVIKIEGKYDIVIKDDELEGY
VTIPGEPTDVHASEIFKSYVVLSWKPPSPRGRAPLWYIIEKCLAGTGAWQRINTAVKLHS
PRYPVFDLQDGQKYQFRVFSVNMYGSSEASAPSEPIQKVDEDGVPSAPGQIVATRNTKSS
VFVQWEAPKHLKSLLGYYIDGRVVGAKEWFPCNHKPFRHNRFVVHGLIPGESYVFRVQAV
NIFGLSEESQESSPIAVEPALATPSAPYGITMLSCDGSSMTLAWKKPKHCGGSKVKAYYI
DKRDADTLVWKEVNLAAVTERICTVDNLTEGTFYEFRIQAANLAGVGLPSAPSTPLKCEA
WTMEQPGPAYDLSFREVRGQSLVILWKAPVYTGADAVTGYFVDMAKKGSSEFVTLNGDPV
SHRYLQVTGLEEGSSYVFRVRAVNSKGVGKTSELSEPVCAKALPGTTEIVAGVDEETGDV
FLSFEACEICETSKFEWSKNYKPIGDCPRATVTAKGRTSRLTFTNPDKDDLGRYSVVVTD
TDGVSSSYTLTEDALNTMLELSYAIRHPVVPLKHNLNYEILEKGHVRFWLQAVKLSPSVS
YRFIVNDKAVTSGEGQKINHDVASGVIQMTVDHFTRANEGTYTVQINDGKAKTQSSLVLV
GDAFKAALKEAEFQRKEHIRKQGPHFSEYLDFTVTEDCTVMLTCKVANVKKDTVFHWYKE
DDEVVPETAPNVMSGSCALPLPLFSRKDQGVYKAVLSDDKGKDTSVFDISGKVFDDIINA
IARNAGASASELVMQCTPEGIRLQCYMNYYTEEMKTVWKHKDSKIASSEKMRIGGTAEMA
WMQICDPSDKEKGHYAIEISDGVTTHTRTFDLSGQAYTDAYEEYLRLKAAAFAEKNRGRV
VGGLPDVVTIMEEKSLSLTCTVWGEPTPEVTWFKNEQEVASNEHTRVTFDGGKFASLVIN
KVTTDDSGKYSINVRNKYGGEFVEITVSVYRHGEPIPEPKLGQPRTAPPAQPVAPKSPAP
SKTPTPSKPQTPAQSMKSPTPAPAATPGTKSPTPPRSVKSPTPPRFMKSPTPPRK
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaagtcataccctggtataagaagaaggctgtgagccaagttaaaactgat
tatgcttatcatcacagtaaacatgttgtcaagcagcagacagaaaggaaatcgagcttc
cagtcagcacagcaggtgcagactcaggccacagaggctatggcagaaccagcctacacc
atcccggcttcccggcagcggactactgcggaaaccgaggagtaccagagagtgagttca
aatgtgggaaaaggtctggctgttattcaggaggagctgcacaggatgaggattgcaact
aaagcgcaagtggaaagtattgcgatccaaaaagaggtgaaggacatgatgaaaaagaga
gtggatttattggaggaaattcccaagatgccagacttcctggtggcccttcggccccac
accgtctgggagaaaaccccggtgaagctgttctgcactgtggagggaaacccacggccc
attgttaaatggtataaaggaggagttccagtcgacccactaagcgccccgggaaagtac
aagattgagagcaagtatggcgtccacagtctgatcattagcaggtgtgtagtgagtgat
actgcagagtatagcgccgtggcaaccaatcagcatggcacagctaccagcaaggccatg
gttattgtaaagagaccatcaggagctggagagtcctgccagcttggtctcgtcccccat
ctgactgagatccatcccagtaagcttgaagtcaccctgctggagagattcccagtgagc
tttggggtggaggggagctccatcagactctcctgcaccatggtggtggttcctgacctg
cccaacgtaccaccgctggcccagtggtaccgagacgacacgctgttgaaacccagtaac
ctggtggagatgtcagtgggtggaggagcagcgtctctgactcttcctcagctggccaaa
gacgatgaaggactctacaccctccggatcttcacgaaggacggcaccgctgagcacagc
gcctacctgtttgtctcagatgctcctgcgtctgtgaaaggagctcctggagctccgatg
agcgtcaaggcgtatgacgtcaactcggactacgtcctggttgcctggaaaccccccaac
acagtcaacgaggcaccaatcaccggatactttgtggatcgctgtgaagctggcactgac
acctgggtccagtgcaacccggcacccgtgaaggtctgcaaatacccggtgagcggcctt
gacgtcggccactcctactacttcagagtgagagccgtgaacagcgcaggcatcagcagg
ccgtcacgcaagtctggcaaagtgaccgccatcgacgccgcggagagtcagcgcctgcaa
gtgataaaaattgaagggaaatatgacatagtgatcaaggatgatgaactggaaggctac
gtaactatccctggcgagcccacggacgtgcatgcgtcagagattttcaaatcgtacgtg
gtgctgagctggaagcctcccagccctcgcggacgagctccgctctggtacatcattgaa
aagtgcttagcaggcactggagcatggcagcggatcaacacagccgtcaaactgcactcg
ccccgttacccggtttttgatttgcaagatgggcaaaagtaccagttccgagtcttttcc
gtcaacatgtacggctccagcgaggcctcggcgccttcggagcccatccaaaaggtcgat
gaggatggcgttccctcggctccggggcagattgttgccaccagaaacaccaagtcctct
gtgtttgtccaatgggaagctccaaaacatctgaaaagcctgctgggttattacatcgac
ggccgggttgtcggagccaaggagtggttcccctgtaaccacaaaccgttcagacataac
aggtttgtggtccacggcctcatcccaggggagagctacgttttccgcgtccaggctgtg
aacatctttggcctcagcgaagagtctcaggagtcctcacccatcgccgtggagccggct
ctggcgactcccagcgcgccgtacggcatcaccatgctgagctgtgacggctcttccatg
actttggcctggaagaaacccaaacactgcggcggatccaaggtcaaggcttactacatc
gacaagcgggacgctgacactttggtgtggaaggaggtcaacctggctgctgtcactgaa
cggatctgcactgtggacaatctaacagagggaactttttacgagttcaggatccaggct
gctaatctagctggtgttggtctaccatcagctcccagtacgccactgaaatgtgaagct
tggaccatggagcagccaggcccggcctatgacctgagcttcagggaggtcagaggtcag
tccctggtcatcctatggaaagctcccgtttatactggagccgatgctgtgactggatac
tttgtggatatggccaagaagggttcaagtgagtttgtgactctgaatggagaccctgtg
agtcatcgttacctgcaggtgactggactggaggaagggagtagctatgtcttcagagtc
cgtgctgtcaattcaaagggagttggaaaaacctctgagctgtctgagccagtctgtgcc
aaagctcttccaggaactacggagatcgtagccggtgtggacgaggagaccggagatgtt
ttcctgtcatttgaggcctgtgagatctgtgaaacatccaagtttgagtggtcaaagaac
tacaagcccattggtgattgccccagagccaccgtcacagcaaagggcagaacctccaga
ctgaccttcaccaatcctgataaggacgatttgggcagatactctgtggtcgtcacagac
accgatggagtttcatccagctacaccctgactgaggacgctttgaacacgatgcttgag
ctcagctacgccatcagacatccagtcgttcctctgaaacacaacctcaactatgagatt
ctggagaagggacacgtgcgtttctggctgcaggccgtcaagctgtctccgtctgtttcc
tacaggttcatcgttaacgacaaagcggttaccagcggggagggtcagaagatcaaccat
gatgttgcttcaggggtcatccagatgaccgtggatcatttcaccagagccaacgaggga
acgtacaccgtccagatcaacgacggcaaagccaagacccagagctccctggtgctggtg
ggagacgcgttcaaggcagctctgaaggaggccgagtttcagaggaaagagcacattagg
aagcaaggtccacatttctctgagtatcttgatttcaccgtcactgaggattgcacagtg
atgctcacctgcaaggtggccaacgtaaaaaaagacacggttttccactggtacaaggag
gatgatgaggttgttcctgagactgcgcccaacgtcatgtctggatcctgcgctcttcct
ctgcctctgttctccagaaaagatcaaggcgtttacaaagccgttctgagtgacgacaaa
ggaaaggacacttctgtttttgacatttctggcaaagtgtttgatgacatcatcaatgca
attgctcgcaatgctggcgcgtctgcctctgagctggtcatgcagtgtactccagagggc
atcagactgcagtgctacatgaactactacacagaggagatgaagactgtctggaagcac
aaggacagtaagattgcgtcctctgagaagatgaggatcggcggcactgcagagatggcc
tggatgcagatttgtgatccttccgacaaggagaagggtcactacgccattgagatctcc
gacggcgttacgactcacacccggacctttgacctctcaggacaagcatacactgatgcc
tatgaagagtatctacggcttaaggcagctgcatttgctgagaagaaccgcggcagagtg
gtgggtggactacccgatgtggtcaccatcatggaggagaagtctctgagcctgacctgc
accgtatggggcgagccgacccccgaggtcacctggttcaaaaacgagcaggaagtggcc
tccaacgagcacaccagggtgacgttcgacggcgggaagttcgccagcctggtcatcaat
aaagtcaccaccgacgactccggcaagtacagcatcaacgtgcggaacaagtacggcggc
gagttcgtggagatcaccgtcagcgtctaccggcacggcgagccgatccccgagcccaaa
ctgggacagcctagaacggcgccgccggcccagcctgtggcgccaaaatccccggcaccc
tccaagaccccgaccccatccaagccccagaccccggctcagtccatgaagagcccgacc
ccggcccccgccgccacccctggcaccaagtcgcccactcctccccgcagcgtcaagtcc
ccgaccccgccccgcttcatgaagtctcccaccccacccagaaagtga
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