Xiphophorus hellerii (green swordtail): 116720335
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Entry
116720335 CDS
T07363
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
xhe04261
Adrenergic signaling in cardiomyocytes
xhe04382
Cornified envelope formation
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116720335
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116720335
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116720335
09158 Development and regeneration
04382 Cornified envelope formation
116720335
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116720335
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116720335
03036 Chromosome and associated proteins [BR:
xhe03036
]
116720335
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116720335
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116720335
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116720335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
116720335
NCBI-ProteinID:
XP_032419414
LinkDB
All DBs
Position
5:complement(12913398..12920391)
Genome browser
AA seq
453 aa
AA seq
DB search
MGEDAESPKINHTFLRDYVTEADVISTVEFNQTGDLLATGDKGGRVVIFQRETESKGVSE
EAGEVGDSGEYNVYSTFQSHEPDFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTVK
LWKVSERDKRPEGYNLKDEEGRIKDVSTITSLRVPVLKPTDLMVEVRPRRVFANGHTYHI
NSISVNSDGETYLSADDLRINMWHLDITDRSFNIVDIKPANMEDLTEVITAAEFHPHHCH
LFVYSSSKGTLRLCDMRASALCDRHTKLFEEPEDPGSRSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMDKGPVETYQVHEYLRSKLCSLYENDCIFDKFECVWNSSDSVIMTG
AYNSFFRMFDRETGRGVTLEAWRENSKPRAVLRTRRVYTGGKRRRGDVGVDSLDFTKKIL
HMAWHPEENIIAIAATNNLYIFQDRVNPDAQMQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggacgctgagagccccaaaatcaaccacaccttcctgagagactacgtcaca
gaagccgatgtcatctctacagtggaattcaaccaaacaggggacctgctggcaacaggg
gataaaggtggccgagtggtcatctttcaaagagaaaccgagtccaagggcgtgtcagag
gaggcaggtgaggtgggggactcgggagagtacaacgtctacagcacgtttcagagtcac
gaacctgactttgattacctgaagagtctggagatagaggagaagatcaacaagatccga
tggttgccgcagcagaatgccgcacatttcctgctttccaccaatgataaaaccgtcaaa
ctgtggaaggtcagtgagagagacaagagaccagaaggatacaatctgaaagatgaggag
ggacgaatcaaggatgtttccaccattacctctctgagggtgccggtgctgaaaccaaca
gatctgatggtagaagttcgccccaggcgggtgtttgcaaatggacacacataccacatc
aactccatctccgtcaatagcgatggggagacctacttgtctgctgatgacctccgcatc
aatatgtggcatctggacatcactgatcgtagtttcaacattgtagacatcaaacctgcc
aacatggaggacctgacagaggtgataacagcagcagagttccaccctcaccactgccat
ctgtttgtgtacagcagcagcaaggggaccctgcgcctctgcgatatgagggcctcggct
ctctgtgacagacataccaaactttttgaggagcctgaagatcccggaagccgttcattc
ttctcagagattatttcctctgtgtcggatgttaagttcagccacagtgggcgctacctg
ctaacaagagattacttgactgctaaggtgtgggacttgaatatggacaaaggcccagtt
gaaacctaccaagtccacgaatacctgaggagtaaactgtgttccctctatgagaatgat
tgcatctttgataaatttgaatgtgtctggaacagctcagacagtgtgatcatgacgggg
gcatacaacagctttttccggatgttcgatcgggagacgggccggggcgtaacccttgag
gcatggagggagaacagcaagcctcgggctgtgctgcggacacgccgggtgtatacgggc
gggaagcgacgccgtggggacgtaggcgtcgacagcctggacttcaccaagaaaatcctg
cacatggcctggcaccctgaggagaatataattgctattgcagccaccaacaacctatac
atctttcaggatcgtgtcaatcccgacgcgcagatgcagtaa
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