Xiphophorus hellerii (green swordtail): 116720361
Help
Entry
116720361 CDS
T07363
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116720361
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116720361
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116720361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
116720361
NCBI-ProteinID:
XP_032419478
LinkDB
All DBs
Position
5:complement(19817458..19840688)
Genome browser
AA seq
739 aa
AA seq
DB search
MPIATAGQPATQEPRVCPRLPSTPEPVPKGADLFEEAGAAESAERTEYGAAEGGRAGFGG
FSFSHSGARSFAQPGSTSGSPPQSPTAASSSFLLHLSHSHQMTMEPPRTRSRSRSGYYQQ
YGVGSNNTGVAVSSHHQHLLHHQQQQQQQQHGAGCAPLGAHSNHSENQQRAPGSNAPPGI
HRLPSVPGAHHIPMTGASGGAYHCHPDHAYGEERDKSEESPSPKRQRLSSQSVLEQLTSS
APLPSTPSPPIRPWESGPPSRRQPHPHTHYHQERCLTPPRLRRSPPARRQRGRLSRPSRH
PPLHHHPSAQGPTPRPSPSERQDENYRHNPLPSAHQTYPAHTPSTYPQPPTAGGGGRGSE
EPRAFHPPTLSSQLLHPAAHHHPHHHHPHHQQQHHATQQQQGAMVLDLHDRLQQGNIPVS
YTVTPVPPHGLAAPLCSGQHIPPSCSSQQQVPTCSVVFSAGQHYHPMLQACSMHHLPVSY
AFPSLLSSDPQFLISPPPHLSHHPPHLPTQFLPFQTQQPRSPLQRIENEVDIVGEQLPVG
GSFSYAHHHHHHHHQPPSALPPSTPLQFLSHHDPLSQDLFTLPYPHFMPRRFASRRYRSQ
QAVPPSPYHPSFLPYFLSMLPVPPNVAPAISLELDVDDGEVENYEALLNLAERLGEAKPR
GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA
NRTCPICRADASEVQRDSE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcaaccgctggacagccagcgactcaggagcccagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgaagaggcgggggcggcg
gagtcggcggagcgtacagagtacggggccgccgaggggggcagagcggggttcgggggc
ttcagtttcagccacagcggcgctcggagctttgcacagcccggttcgaccagcggctct
ccgccgcagtccccgaccgccgcctcctcctcgttcctcctccacctctctcactcccac
caaatgactatggaaccccctcggactcgatcgcgttctcggtctggatactaccagcag
tacggggttgggagtaacaacaccggagttgcggtgtccagccaccaccaacacctcctc
caccaccagcagcagcagcagcagcagcagcacggagccggctgcgcaccgctcggagct
cacagcaatcactcggagaaccagcagcgagcaccgggaagcaacgcccctcccggcatt
caccggctcccctcagtgcccggggcgcaccacatcccgatgacaggggcttctggtgga
gcatatcactgccaccctgaccatgcatatggagaggagagggataagagtgaggaaagc
cccagtccgaagcgccagaggctgtccagtcagtccgttttagagcagctgacctcatct
gcacccttgccatctacgccgtcgccccccatccgcccatgggagtcaggacctccgagt
cggcggcaacctcaccctcacacacactaccaccaggagaggtgcctcactcctccacga
ctcagacggagtccgcccgcgaggcgccaacgcggccgtctctccaggccgtcccgccac
ccgcctcttcatcaccatccctccgctcaaggacctacacctcgcccgtcaccgtctgag
cgtcaggacgaaaactaccgccacaaccccctcccctcggcacatcagacgtacccagca
cacactccaagcacttatcctcagccccccacagccggcggaggaggccgaggttctgag
gagccccgagccttccacccccccacattatcgtcgcaactgttgcacccggctgcccat
catcacccccatcatcaccatcctcaccaccagcaacaacatcatgcaacacaacagcag
caaggagccatggtgttggacttgcacgatcggctgcagcagggcaacatacccgtctcc
tacacagtgacccctgtccctccacacggcctggcagcgcctctgtgtagcggtcagcac
attcccccctcctgctcctctcagcagcaggttcccacctgtagtgtggtcttcagcgct
ggacaacactaccatccgatgttacaggcatgttcaatgcatcatttgccggtttcctat
gcgtttccctcactactgtctagtgaccctcagttcctgatttctcctccacctcatctc
tcccaccatccgccccacctgcccacacagttcctgccttttcagactcaacagccaaga
tcgcccttacagaggattgaaaacgaggttgatatagtgggagagcagctccctgttgga
ggaagcttcagctacgcccaccatcaccaccaccaccaccaccagcctccctccgccctg
ccgccttccactccgctccagttcctttcacaccatgaccccctgtcccaagatcttttt
acactgccatatccccactttatgcctcggcgattcgccagtcgccgttaccgctcgcag
caggccgtgcccccatctccctaccatcccagcttcctgccttacttcttgtcaatgctt
cctgttcccccgaatgtggctcctgccatcagcctagagctggatgtggatgatggagag
gtggaaaactatgaggccctgttgaacctcgccgagcgtctgggggaagccaaacccagg
ggtctaaccaaggcagatatagaacagcttccatcatacaggtttaaccccaacaaccat
cagtcggagcagacactatgtgtcgtttgtatgtgtgacttcgagtcccgccagcttctc
agagttctcccctgtaatcacgagttccacgccaaatgtgttgacaaatggcttaaggct
aaccgcacctgccccatctgtcgagccgatgcctctgaggtccagcgggactctgagtga
DBGET
integrated database retrieval system
