Xiphophorus hellerii (green swordtail): 116720518
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Entry
116720518 CDS
T07363
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116720518
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
116720518
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
116720518
NCBI-ProteinID:
XP_032419713
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Position
5:5017784..5036853
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AA seq
542 aa
AA seq
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MEEKESGGGEGGEGGFYRSAKRPRTEEEEEADARDVEEGEEKEEETGSVEEDAAGSGCYD
SRSRRRKDSHLIPPSPVVHVRGLCDAVVEADLVEVLEKFGTICYVMMMPFKRQALVEFDS
LESAERCVRSGGSEPVFIANQQAFFNFSTSQRITRPTNSDDPTSKNKVLLLSIQNPLYPI
STDVLYTVCNPVGNVQRIVIFKRNGIQAMVEFQSVEDAQKAKMALNGADIYSGCCTLKIE
YARPNRLNVVRNDTSSWDYTKPFLLHRDRGKGRQRQAILGEHPSNGYGPHCPLLPLPPNS
RYRRSHEPVPELVSYKQLVPKTFSSTRPSALLGSSAVAMVSSLHPNEMNCSRLFNLFCLY
GNVEKVKFMKSIPGTALVEMADEYAVDRAVTHLNGTKVFGKKLNVCVSRQQAVIPSQVFE
LADGSSSYQDFSLTRNNRFSTTHSHRNIIQPPTAVLHFYNAPPTLNQQQLLKFCSEHNAP
AFTKYKVFDAKPSSKTLSGLLEFDCKTAAVEALIMLNHHQFRIAGSSNPFTIKLCFSTST
HL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggagtcaggaggaggagaaggaggagaaggaggattttaccgttcagcc
aaacgaccccggacggaggaagaggaggaggccgatgccagggatgtggaggaaggtgaa
gagaaggaggaagaaacgggctccgtcgaggaggatgcagcggggagcggatgctacgac
agcaggagccgaaggaggaaggacagtcacctcatccccccttcgcccgtcgttcatgtc
cgaggattgtgtgacgccgtggtggaggccgacctggtggaagtgcttgaaaagtttggc
accatctgttatgtgatgatgatgcccttcaagcgtcaggctctggtggagttcgacagc
ttggagagcgcggagcgatgcgtgaggagcggaggcagcgagcccgtcttcatcgccaac
cagcaggccttcttcaacttctccaccagccagagaatcacccgacccaccaactcagac
gacccgaccagcaaaaacaaggttctgctgctgtccatccagaacccgctgtaccccatc
agcactgatgttttgtacactgtgtgcaaccctgtgggtaatgtccagcgcatcgtcatc
ttcaaacgcaacggcattcaggccatggtggaatttcaatccgtggaagacgctcagaaa
gccaaaatggctctaaatggagcagacatttactccggctgctgcacgctgaagatcgag
tatgctcggcccaacagactgaacgtcgtccgcaatgacacctccagctgggattacacc
aaacccttcctcctgcaccgagatcgggggaagggaaggcagcgtcaagccatcctggga
gagcatccatccaacggctacggccctcactgccccctgctgccgctgcctcctaacagc
cggtacaggagaagccatgagccggtgccggagctggtttcctacaagcagctcgtccca
aagaccttctcctccacccgtccctccgccctgctgggctccagcgccgtcgccatggta
agcagcctccatcccaacgagatgaactgcagccgcctcttcaacctcttctgtctctac
ggcaacgtggaaaaggtgaagtttatgaagagcattcctggaacggcgctggtggagatg
gcggatgagtacgcagtggaccgcgccgtgacccacctcaacggcaccaaggtgttcggg
aagaaactaaacgtctgtgtgtccaggcagcaggcggtgattcccagtcaggtgtttgaa
ctggccgacggcagcagcagctaccaggacttcagtctgaccaggaacaatcgcttcagc
accacacacagccacagaaacatcatccagccgcccaccgctgtgctgcacttctacaac
gccccgcccaccctcaaccagcagcagctgctaaaattctgttctgaacacaacgctcct
gccttcaccaagtataaagtctttgatgccaaacccagctctaagactctctccggtttg
ttggagtttgactgtaaaactgctgctgttgaagctttgatcatgctcaaccaccaccag
tttagaatagctggcagctccaaccccttcaccattaaactctgcttctcaacttccacg
cacctgtga
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