Xiphophorus hellerii (green swordtail): 116720522
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Entry
116720522 CDS
T07363
Name
(RefSeq) B-cell receptor CD22-like
KO
K06467
CD22 antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116720522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116720522
04090 CD molecules [BR:
xhe04090
]
116720522
04091 Lectins [BR:
xhe04091
]
116720522
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
SIGLEC family
116720522
CD molecules [BR:
xhe04090
]
Proteins
116720522
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116720522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
Ig_5
Ig_4
V-set
Ig_CD22
C2-set_2
DPBB_1
Ig_6
PKD
GBS_Bsp-like
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
116720522
NCBI-ProteinID:
XP_032419722
LinkDB
All DBs
Position
5:complement(26499740..26508305)
Genome browser
AA seq
488 aa
AA seq
DB search
MSFSAAIRGVIVLLMAADVCGQDGWGVTYSRPSICALKGSTVEMSCNYIYPVIYNNKYIV
IVKKSWITKVLNGNYVDLKDDTDYSGRVEYSCTKTSCSLKISNVRQTDSKEYKFRFTTNH
PSGKYTGSPGVSLSVTDPQVKVNRVNDPIRIQLTCHTDCQLPHPVSYVWLEDGKANKESN
NNLVLSSFNTTHRYQCAIRGHEDVPSPAVYAPQTIVLSVTPSETVEGSKVTLTCSSDANP
AANYTWYRGKDNKLLESNKNLTFDSIKSMDSGQYYCTAINKMGQNNSTVNVDVKYAPRSP
SVSQSPSGDIVVGSSVTLTCSSDANPAANYTWYKEGEKAQKASGERFNITNIQNEHSGNY
YCKVQNKIGHHNTSVSVTVVPGQSKIVVFGTVASILLIMIFLLVFLISRKWRTSTPPPKP
GGNPNNIEQNQNSLSKSQEDLQYASVRFLRKQRAPEYENFQPGKTGTADLEEEGEQNVEY
ASVKFGQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtttctcagcagcgatccgtggagttatcgtccttctcatggcagcagatgtttgt
ggtcaggatggttggggagtgacttatagtcgtccttccatttgtgccctaaaaggatca
acggtggaaatgagctgcaactatatttacccagtcatatacaacaacaaatatattgtt
atagtgaaaaaatcttggattacaaaagtgcttaatggaaattatgtggatctgaaagac
gacacagattattcaggtcgtgtggaatacagttgcacaaagacttcctgctctctgaag
atctctaatgtgagacaaactgactcaaaagagtacaagttcaggttcacaacaaaccat
ccaagtggaaaatacacgggttcacctggagtctctttatctgtcacagatccacaggtg
aaggtaaacagagtaaatgatccaatcaggatccagctgacatgtcacactgactgtcag
ctgcctcatccagtttcctacgtctggctggaggatgggaaagcaaacaaagaaagtaac
aataatttggtcctgtcctcatttaataccacacacagatatcagtgtgcaataagagga
catgaggatgttccatctcctgcagtgtatgctccacagaccatcgttctgtcagtgacc
ccctcagaaactgttgaaggctctaaagtgactctgacctgcagcagtgatgctaatcca
gcagctaactacacctggtacaggggaaaagacaacaaactcctggaatcaaataaaaat
cttaccttcgactccatcaagtcgatggattctgggcaatattactgtacagccataaac
aagatgggacaaaacaactcaacagtcaatgttgatgttaaatatgctcccagatctcct
tcagtgtctcagagtccgtctggtgacatcgtggtgggtagctccgtgactctgacatgt
agcagtgatgctaacccagcagctaactacacctggtacaaggagggagagaaggcacaa
aaagcttcaggagaacgcttcaacatcaccaacatacaaaatgaacacagtgggaactat
tactgtaaagtccagaacaagataggacatcataacacctctgtatctgtgactgttgtg
ccagggcaatcaaagatagtagtctttgggactgttgcttctattttgctgatcatgatt
tttctccttgtcttcttaatatcgagaaagtggagaacatcaacaccaccgcctaagcct
ggaggaaaccccaacaacattgagcagaaccaaaacagcctgtcgaagtcgcaggaagac
cttcagtacgccagcgtccggttcctgaggaagcagagagctcctgagtatgaaaacttt
caacctggtaaaaccggcacagctgatctggaggaagagggcgagcagaacgtagagtac
gcttctgtcaagtttggccagaggtaa
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