Xiphophorus hellerii (green swordtail): 116720532
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Entry
116720532 CDS
T07363
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116720532
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Others
Others
116720532
Endosome - Lysosome transport
116720532
Endosome - Golgi transport
116720532
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
116720532
NCBI-ProteinID:
XP_032419731
LinkDB
All DBs
Position
5:complement(1427037..1637373)
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AA seq
1196 aa
AA seq
DB search
METRVGTRPGSRVSLGLWLLITAHALQHARAEISCGSCPSPVQLHREELQLAPGLRSDPA
EEAVAVREPRVTGRESGMLATSGPNFSLDEVKPAGSESGVAEDAAPWRAKRSAPDLSEFS
DSDWTGRTAQLDSHKAGRSEFGWNRQDERGNTRQDEPRLNSSTFALTGDSAHNHAVVYWT
GQNSSVILILTKLYDFHIGSVTESTLWRSTDYGSTYERMNDKIGSKAVLSYLYVCPTNKR
KIMVLTDPEFESSVLISTDEGASFQKYRLSFFVLSLLFHPTEEDWALAYSHDQKLYSSVD
FGRKWMLIHEHVTPNRFYWSVSGLDKEPDLVHMEAHTPDGNVQYVTCRAQMCSEANRNYP
FPGYIDISSLVVQDDYIFIQVPTSGRATYYVSYKREAFIQIKLPKYSLPKDLHIVSTDGK
QVFAAVQEWNQNDTYNLYLSDTRGIFFTLAMENVKTTRGIAGNQMLDLYEVAGIKGMLIA
NKKQDNQVKTYITYNKGRDWRLLQAPTADLEGNNIHCILPSCSLHLQLQLSENPYVSGTI
STKSSAPGIIVATGNIGAELSYNNVGMFVSSDAGNNWRPIFEEEHNIWFLDKGGALVAVK
QPSVPTKHLWVSFDEGRQWTQHSFSSALLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLI
KIDYKSIFSRKCTEEDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGRDYSRILSAES
CICRAHDFECDYGYERRNDGNCRPAFWFNPSSVSRSCSQGQNYFNSTGYRKVVLNNCTKG
VKEMYTARKQQCPNRPPKGLSLATKDGKVTANMGSNVTFVVHLDEGDSLRTNIQLDFGDG
TAVSYSNLSWTEEGIKHVYKSAGIFRVTALAENTLGSDTTTLYLHVTCPVEHVQLLAPFV
VIRNKEVNITAVVLPSQSRTVTYFWWLGNNTEPVITLDGSVSYTFRSEGMHSITVQVAAA
NGILQDTKSIAVKEFFKSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEDQL
LVAVFPGVPTAAELFLLPNKNQSEGKKKSEEELEKASSVIVSALNQNLVEFELKPGVRVI
VYNTQLTLAPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKE
QEMIGSVGQGDSTPKITLSEFTASKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggagactcgggttggcacccgcccaggctctcgcgtctctctgggtctctggctgctg
atcaccgctcatgctctccaacacgccagggcggagataagttgcggatcttgcccgtcg
cctgttcaacttcaccgggaggagctgcagctggcgccggggttgcgctccgaccccgcg
gaggaggcggttgcggtcagggaaccccgggttaccggtcgggaatctgggatgcttgct
acttctggccctaattttagtttggatgaagttaaaccagccggttctgagtctggggtg
gctgaggatgctgcgccctggagagccaagaggagcgctccagacttgagcgagttcagc
gacagcgactggaccggccggaccgcgcagctggatagccacaaagctggccggtcggaa
ttcgggtggaacaggcaggatgagagagggaatacccggcaggatgagcccaggctcaac
agcagcaccttcgctctcactggggactctgcgcacaaccacgccgtggtctactggacc
ggacaaaacagcagcgtcatccttattcttaccaaactctatgactttcacatcggcagc
gtcacggagagcactctctggagatccacagactacggatcaacatacgagagaatgaac
gacaaaattgggtccaaggccgtcctcagttacctttacgtttgcccaaccaataaaagg
aagattatggtcctgactgatccggagtttgagagcagcgtgctcatcagcactgatgag
ggagccagtttccagaagtaccgcctctccttcttcgtcctgagccttttattccacccc
acagaggaggactgggccttggcctacagccacgaccagaagttgtacagctcagtcgac
tttggaaggaagtggatgctcatccacgaacacgtcaccccgaacagattctactggtct
gtttctggactggacaaagaaccagacctggtccacatggaggctcacactccggatgga
aatgtgcagtatgtcacatgcagagctcagatgtgctctgaagccaaccggaattatcca
ttcccgggatacatcgacatcagctctctggtggttcaagatgactacattttcatacag
gttcccacctccggacgagcgacttactacgtctcctacaagagagaagctttcatacaa
atcaaactgccaaaatactccctgcctaaggatttacacatcgtcagcactgatgggaag
caggtctttgcagcagtgcaggagtggaaccaaaacgacacctacaatctctacctgtct
gacaccagagggatcttcttcaccttggccatggaaaatgtcaagacaaccaggggcatc
gctgggaaccagatgttggacctctatgaggtggctggaatcaaaggaatgctaatcgca
aacaagaagcaggacaaccaggtgaagacctacatcacctacaacaagggccgggactgg
aggctccttcaggcgccgactgcagacctggagggaaacaacatccactgcattctgcca
tcttgttcccttcatctccaactgcaactgtcagagaacccttacgtgtcgggaacgatc
tccaccaagagctctgctccggggatcatcgttgccacaggaaatattggagcagagctg
tcttataacaacgttggcatgttcgtatcatcggatgcaggcaacaactggagaccgatt
tttgaagaagagcataatatctggtttctggataaaggaggcgccctcgttgcggtgaag
caaccatctgtgccaactaaacatctctgggtcagctttgatgaagggaggcagtggacc
cagcacagcttctcctcggcgctgctgtttgtggacggcgtgttggtggaggccggagcg
gagaaccagatcatgaccttctttggacatttcagccaccgctctgagtggcagctcatc
aagatagactacaaatccatcttcagcaggaagtgcaccgaggaagactaccaaacctgg
cacctgcacaacaagggcgagccgtgtgtaatgggtcagaagcagatttacatgaaacgc
cggcctggaaactactgcatgctgggaagggactactccagaatcctctcagctgaatcc
tgtatttgccgagctcatgattttgaatgcgattatggatacgagcggcggaacgacggg
aactgccggccggccttctggttcaatccgtcctctgtgtccagaagctgcagccagggt
cagaactacttcaacagtacagggtaccgtaaagtggtgctgaacaactgcaccaagggc
gttaaggagatgtacacggccaggaagcagcagtgccccaacaggcccccgaaaggactc
agcctggccaccaaagacgggaaagtcaccgccaacatgggcagcaacgtcacctttgtg
gtgcacctggacgagggagactctttgaggacaaacatccagctggactttggcgatggc
acagcggtctcctactctaacctgagctggacggaagagggcatcaaacacgtctacaag
tcagcgggaatattccgagtcacggcgctagcagaaaacacgctgggctccgacaccacg
acgttgtacctgcatgtcacgtgtccggtggagcacgtccagctccttgctcccttcgtg
gtgatcagaaacaaggaggtgaacatcacagcagtggtcctgcccagccaatcacgcact
gtcacctacttctggtggcttggcaacaacacggagccggtgataactttggatggaagt
gtttcatacaccttcaggagtgaagggatgcacagcatcacggttcaagtggcggcagct
aacggcatcctgcaggacaccaagagcatcgcggtcaaagaattcttcaaatctctgctt
ttatctttctccccgaacttggacgagttcaaccccgacatacccgagtggaggcaggat
gtggggagagtaattaagaaggctctgctacaagtgtcggacttcccagaggatcagctc
ttggtcgccgtttttccaggagttccaacagctgcagaactctttctgttacccaacaag
aaccaatccgaggggaagaaaaagagtgaggaagagctagagaaggcgtccagcgtcatc
gtaagcgcactgaaccaaaaccttgtggagtttgagctgaagcctggcgtcagagtcatt
gtctacaacacgcagttaacgctggcgccgctggtggactccagtcccagacacagcagc
tctgcgatgctcatgctcctgtctgtggtgttcctgggcctcgccgtcttcctcatctac
aagtttaagagaaaaataccttggatcaacatatacgctgaggtgaaccaggagaaggag
caggagatgattggctcggtcggtcagggcgacagcacgccgaaaatcactctgagcgag
ttcacagcatccaaagagctcatggagaaggaactggatgcccgggtcaagagaggagtc
ggaaacgcctgcgagagcacaagggagattccaaactgtaccagcgtgtaa
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