Xiphophorus hellerii (green swordtail): 116720546
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Entry
116720546 CDS
T07363
Name
(RefSeq) platelet endothelial cell adhesion molecule-like isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04148
Efferocytosis
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116720546
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116720546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xhe04090
]
116720546
00536 Glycosaminoglycan binding proteins [BR:
xhe00536
]
116720546
04091 Lectins [BR:
xhe04091
]
116720546
CD molecules [BR:
xhe04090
]
Proteins
116720546
Glycosaminoglycan binding proteins [BR:
xhe00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116720546
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116720546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
Ig_C17orf99
ig
I-set
C2-set_2
Big_3_5
V-set_CD47
C1-set
Ig_C19orf38
CAP-like_CFAP184
Motif
Other DBs
NCBI-GeneID:
116720546
NCBI-ProteinID:
XP_032419755
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All DBs
Position
5:complement(17320325..17339209)
Genome browser
AA seq
722 aa
AA seq
DB search
MGLLPLFTSTLLFSWTTLNAALKITKVDLSIEPSAAVYRDTNVALRCKAEVLAFGTEALN
RVYTIYKGDSVIYNKTTSSSEDLLYHLPQARVSNNGKYKCKISIMGEEKASEAATLTVEG
MSTPILRFNKANITEGESVTATCLAPGETGSLLFSFYDNSKEVENARVTSNELTFVPKGV
GNHIIHCSYLVFIMPNSFKSQTSNTVTLTVEELSIEPVLKISPQDNVYEGDTVNITCSVS
NVTKDYQAGELLLSQDTELLKSGKTSIHVSWTAHARTPMLTIKCRLYLRDVVKVVNKTVS
VSELFSVPTLKMSALEVFQEDEISLTCRSEKLSYDRLEGEFLIYSLEPFDYHMVQKGNGV
FVGKAKTIDFNYTCTAAAKGIKKKSNVLTIHPKVPVSTPKIWVSGSAILGRKVEIFCLSD
TGTPPITYTLLKANKQNQIAIVHEFNKAANFTIVINEPGRLNHYLCTASNGDRAPELSDK
LQTAVIEPMTEAYLMVVPDVDDISEGHTVILICSFLGTPPVTVRWLRDSDGLNPLKTTTT
NINTTNYEFVVNKEHTDNYYCQAENRANSVESNKINLVVGMAMWKKLLIPGTIILVVSSL
VMVGFILFTRSRRVRVDRTPESVWSSRKPEAEIDDDSSTLSNEPEVEYTEVVHPRSSDPT
KNPLRKGTDTVYSELQNSPHGAADHHDYGSVKYVDLNGDQQPGITQHSPKDISYSDLPMP
VD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcctgccgctgttcacctccacgctcctgttcagctggacaactttgaatgca
gctttaaaaataacaaaagtggacctgtccatcgagcccagtgctgctgtgtatagagac
accaacgtggctttgagatgcaaggccgaggttctcgccttcgggacggaggcactgaat
cgtgtgtacaccatatacaaaggtgacagtgtaatctacaacaagacaaccagctcctct
gaggatttgctctaccacctgcctcaggccagagtctccaacaatggcaagtacaagtgc
aagataagcatcatgggagaggagaaggccagtgaagctgcaacactcacagtggaaggc
atgtcaacgcccattctccgcttcaacaaagctaatatcactgagggggaatcagtaaca
gccacatgtttagcaccaggagagacgggttcccttttgttcagcttctatgataactcc
aaggaagtcgaaaatgccagggtgacctccaacgaactcacgtttgtccctaaaggcgtt
gggaaccacattattcactgctcctacttggtcttcatcatgccaaactcattcaagtcc
caaacaagcaacacagtcactcttaccgttgaagaactttccatcgaaccagtcctgaag
atttcccctcaggataatgtctacgaaggtgacactgtcaacatcacttgctcggttagt
aatgttacgaaggactaccaagctggagagctcttgctgagtcaggacaccgaactactc
aagagtggaaaaacatctatccatgttagctggactgcacatgcaagaaccccaatgctt
accattaaatgccggctgtatctgagagatgtagtaaaagtcgtcaacaagacagtttca
gtgagcgagctgttctccgtgcccactctcaagatgtctgctctcgaagtcttccaagaa
gatgaaattagtctaacatgcagaagtgagaaactgtcttatgatagacttgaaggagaa
ttcctcatttacagtcttgaaccttttgactaccatatggttcaaaaagggaatggagta
ttcgttggtaaagccaagacaattgatttcaactatacatgtacagctgctgcaaagggc
atcaagaagaagagcaatgtgctgacaattcatcctaaagttcctgtctcgactccaaag
atctgggtctctggcagtgcaatcctcgggaggaaagttgaaatcttctgtctgtcagac
acaggcaccccacccattacatacaccctgttgaaggctaacaaacaaaaccaaattgcc
attgttcatgagttcaataaagctgctaactttacaatcgtcatcaatgaacctggaaga
ctaaaccactacctttgcacagcaagtaatggggacagagcgcctgagctaagtgataaa
ctccaaacagctgtcattgagccaatgactgaagcatatctgatggtcgttcctgacgtc
gatgacatttccgaaggacatacggtcatcctcatttgttccttcttgggcacaccacct
gtaacagtaaggtggctccgggacagtgatggtctaaatccactgaagaccacaaccaca
aatattaacaccacaaactacgaattcgttgtgaataaggaacacaccgacaattactac
tgccaggctgagaaccgagccaactctgttgaaagtaataaaatcaacttagtagtcggc
atggcaatgtggaagaaattactgattcctgggaccataatactggtggtttcctcactc
gtgatggtgggctttattctgttcacaagatccaggagagtgagagtggacagaactcca
gagagcgtatggagcagcaggaaacctgaagcagaaattgatgatgatagcagcacgttg
tccaacgagccagaagtggagtacacggaggtggtgcatccgcgctcatcagatcctact
aaaaaccctcttagaaaaggcacagacaccgtttacagcgagctccaaaactctccacat
ggtgctgctgaccatcatgactacggttcagtaaagtatgttgatctgaatggagaccaa
caacctgggatcacgcagcacagtcctaaagatatcagctactcagatctgccgatgcct
gtggattaa
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